Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.97□□□□□ -1.93
ERCC4Q92889 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 Y_RNA.180-201ENST00000363867 113 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 RNU6-234P-201ENST00000365229 104 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 PCNPP3-201ENST00000393579 471 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 MIR300-201ENST00000401138 83 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 MIR1185-2-201ENST00000408687 86 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.96□□□□□ -1.94
ERCC4Q92889 RNU7-120P-201ENST00000459334 63 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.96□□□□□ -1.94
ERCC4Q92889 ATP5EP1-201ENST00000510257 156 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 RNU5F-4P-201ENST00000516581 114 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 AC109329.2-201ENST00000519658 482 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 MIR3199-1-201ENST00000582434 88 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 AL356280.1-201ENST00000603614 379 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 U6.115-201ENST00000636045 103 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 ZNF271P-202ENST00000465539 1970 ntBASIC2.96□□□□□ -1.94
ERCC4Q92889 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
ERCC4Q92889 MIR6073-201ENST00000352083 89 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 RNU6-1305P-201ENST00000364353 104 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 RNU6-1248P-201ENST00000391096 64 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 AL031003.1-201ENST00000404229 172 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 MIR1283-1-201ENST00000408494 87 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 AC087499.2-201ENST00000432861 149 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.95□□□□□ -1.94
ERCC4Q92889 AL445687.1-201ENST00000439946 251 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 AC025750.2-201ENST00000442609 450 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 RN7SKP132-201ENST00000516001 208 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 MIR449C-201ENST00000516047 92 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 RNU1-104P-201ENST00000517280 175 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 AC069294.1-201ENST00000608397 350 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
ERCC4Q92889 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
ERCC4Q92889 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.95□□□□□ -1.94
ERCC4Q92889 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
ERCC4Q92889 RNU6-545P-201ENST00000362681 104 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 RNU6-1272P-201ENST00000362776 107 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 RNU6-1062P-201ENST00000383908 107 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ERCC4Q92889 AL135790.2-201ENST00000437701 267 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 RNU7-14P-201ENST00000459331 62 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 AC090515.1-201ENST00000465295 476 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 SRIP1-201ENST00000489235 288 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 AC023141.11-201ENST00000508864 202 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 Y_RNA.679-201ENST00000516416 91 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.94□□□□□ -1.94
ERCC4Q92889 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.94□□□□□ -1.94
ERCC4Q92889 ELOCP29-201ENST00000588193 334 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 AL033523.1-201ENST00000605153 153 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 snoU18.1-201ENST00000629629 71 ntBASIC2.94□□□□□ -1.94
ERCC4Q92889 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.94□□□□□ -1.94
ERCC4Q92889 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
ERCC4Q92889 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
ERCC4Q92889 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
ERCC4Q92889 SNORA67.1-201ENST00000364749 141 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 SNORD31B-201ENST00000364977 69 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 Y_RNA.304-201ENST00000365011 112 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 RNU6-886P-201ENST00000384319 105 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 MIR218-1-201ENST00000384999 110 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 Y_RNA.793-201ENST00000411222 111 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 CR769767.1-201ENST00000436337 346 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 AC016925.1-201ENST00000458303 298 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ERCC4Q92889 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.93□□□□□ -1.94
ERCC4Q92889 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.93□□□□□ -1.94
ERCC4Q92889 AL078604.3-201ENST00000615580 211 ntBASIC2.93□□□□□ -1.94
ERCC4Q92889 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ERCC4Q92889 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.93□□□□□ -1.94
ERCC4Q92889 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
ERCC4Q92889 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
ERCC4Q92889 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
ERCC4Q92889 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
ERCC4Q92889 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ERCC4Q92889 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
ERCC4Q92889 SNORD114-7-201ENST00000362520 77 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 RNU6-211P-201ENST00000384047 107 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 AL603908.1-201ENST00000406098 201 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 RNA5SP181-201ENST00000410246 98 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 RNA5SP21-201ENST00000410917 96 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
ERCC4Q92889 SUMO1P2-201ENST00000452524 304 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 SNORA59A-201ENST00000459326 152 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 Y_RNA.637-201ENST00000459424 114 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.92□□□□□ -1.94
ERCC4Q92889 RNA5SP82-201ENST00000516707 92 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 AC024405.2-202ENST00000532731 184 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.92□□□□□ -1.94
ERCC4Q92889 MIR3684-201ENST00000579779 74 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 MIR4513-201ENST00000581077 86 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.92□□□□□ -1.94
ERCC4Q92889 AL008718.3-201ENST00000610217 321 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 MIR5739-201ENST00000619803 80 ntBASIC2.92□□□□□ -1.94
ERCC4Q92889 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ERCC4Q92889 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
ERCC4Q92889 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ERCC4Q92889 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ERCC4Q92889 Y_RNA.150-201ENST00000363562 102 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms