Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SLC44A1Q8WWI5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-1164P-201ENST00000364428 107 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 Y_RNA.380-201ENST00000365663 111 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 MIR548B-201ENST00000385247 97 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 HMGN2P39-201ENST00000398005 273 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 Y_RNA.713-201ENST00000517013 96 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 MIR4659A-201ENST00000580269 81 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 AC007229.1-201ENST00000590455 412 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 AC040896.1-201ENST00000613819 479 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 AC240442.1-201ENST00000616055 283 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 AL162373.1-201ENST00000620433 407 ntBASIC1.99□□□□□ -2.09
SLC44A1Q8WWI5 Y_RNA.458-201ENST00000384240 102 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 SNORA67.3-201ENST00000384366 140 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 Y_RNA.551-201ENST00000384661 102 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 MIR1185-2-201ENST00000408687 86 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-101P-201ENST00000410323 104 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 AC139712.2-201ENST00000424302 339 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 RAB28P5-201ENST00000427490 651 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 RPEP5-201ENST00000441137 268 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 snoU13.15-201ENST00000459407 104 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-625P-201ENST00000459412 107 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 snoU13.26-201ENST00000459452 105 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 RNU7-57P-201ENST00000459540 60 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-221P-201ENST00000459541 99 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 Y_RNA.715-201ENST00000517082 110 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 AC006504.6-201ENST00000590142 199 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 AC008749.1-201ENST00000597650 306 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 AC124312.5-201ENST00000604451 268 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 AC007742.2-201ENST00000618226 398 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 snoZ196.1-201ENST00000625269 89 ntBASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.98□□□□□ -2.09
SLC44A1Q8WWI5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 SNORD115-3-201ENST00000363100 82 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 Y_RNA.455-201ENST00000384230 98 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-1160P-201ENST00000384546 104 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 MIR1252-201ENST00000408861 65 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-985P-201ENST00000410182 104 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-1137P-201ENST00000517073 99 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 RNU2-19P-201ENST00000517288 84 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 MIR4529-201ENST00000578110 78 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SLC44A1Q8WWI5 AP006437.1-201ENST00000641440 3685 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-961P-201ENST00000363893 105 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.230-201ENST00000364348 109 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.389-201ENST00000383924 113 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-418P-201ENST00000384035 107 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.498-201ENST00000384460 102 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 AL353689.1-201ENST00000438895 199 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 U8.20-201ENST00000459445 131 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 MIR3169-201ENST00000578032 83 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 MIR3684-201ENST00000579779 74 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 AC113195.1-201ENST00000579952 141 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 AL109918.3-201ENST00000603072 338 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 AL355297.3-201ENST00000604082 446 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.772-201ENST00000606692 102 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 AC130454.1-201ENST00000622948 401 ntBASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SLC44A1Q8WWI5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 RNU1-58P-201ENST00000362413 163 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 SNORD114-6-201ENST00000364393 72 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.276-201ENST00000364732 109 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-926P-201ENST00000384075 107 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 Y_RNA.471-201ENST00000384312 102 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 MIR518A2-201ENST00000384966 87 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 RNA5SP465-201ENST00000391195 109 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 AC073910.1-201ENST00000445047 438 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 AC016717.1-201ENST00000448918 286 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 RNU6-408P-201ENST00000515910 100 ntBASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.95□□□□□ -2.1
SLC44A1Q8WWI5 AP002001.1-203ENST00000534002 267 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms