Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SNORA11-201ENST00000408789 128 ntBASIC4.35□□□□□ -1.71
PTCD2Q8WV60 RNA5SP38-201ENST00000410750 119 ntBASIC4.35□□□□□ -1.71
PTCD2Q8WV60 AC123900.1-201ENST00000420390 96 ntBASIC4.35□□□□□ -1.71
PTCD2Q8WV60 AL512326.2-201ENST00000426359 151 ntBASIC4.35□□□□□ -1.71
PTCD2Q8WV60 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCD2Q8WV60 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCD2Q8WV60 PARP1P2-201ENST00000556806 195 ntBASIC4.35□□□□□ -1.71
PTCD2Q8WV60 MIR432-201ENST00000606207 94 ntBASIC4.35□□□□□ -1.71
PTCD2Q8WV60 MIR4727-201ENST00000622232 55 ntBASIC4.35□□□□□ -1.71
PTCD2Q8WV60 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCD2Q8WV60 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
PTCD2Q8WV60 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCD2Q8WV60 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCD2Q8WV60 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTCD2Q8WV60 snoU2-30.2-201ENST00000362805 70 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 RNU1-105P-201ENST00000363470 161 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 SNORA70.2-201ENST00000364506 135 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 Y_RNA.299-201ENST00000364973 94 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 Y_RNA.467-201ENST00000384297 102 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 RNA5SP144-201ENST00000410846 116 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 AC011998.1-201ENST00000433403 117 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 HLA-N-201ENST00000437516 135 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 SNRPGP3-201ENST00000469405 227 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 RNU1-142P-201ENST00000516682 145 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 RNU7-128P-201ENST00000517247 62 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 IFITM8P-201ENST00000522529 394 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 AP002004.2-201ENST00000531656 154 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCD2Q8WV60 AC113403.1-201ENST00000604910 193 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 AC140479.6-201ENST00000633535 357 ntBASIC4.34□□□□□ -1.71
PTCD2Q8WV60 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PTCD2Q8WV60 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.34□□□□□ -1.72
PTCD2Q8WV60 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 Y_RNA.4-201ENST00000362333 112 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 RNU6-546P-201ENST00000383991 107 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 MIR1179-201ENST00000408703 91 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 RN7SL303P-201ENST00000469773 251 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 AC106707.2-201ENST00000484182 374 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 AL592156.1-201ENST00000508758 304 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 MIR7702-201ENST00000621931 59 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 AC095038.3-201ENST00000634439 195 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 AC006160.2-201ENST00000637708 154 ntBASIC4.33□□□□□ -1.72
PTCD2Q8WV60 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCD2Q8WV60 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 SNORA1B-201ENST00000362535 133 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 SNORD116-10-201ENST00000363791 102 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 Y_RNA.377-201ENST00000365644 108 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 SNORD38C-201ENST00000384381 69 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 RNU6-679P-201ENST00000391003 106 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 RNA5SP252-201ENST00000391131 119 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 RNA5SP467-201ENST00000391274 118 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 AC002984.1-201ENST00000591692 448 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 AC096720.1-201ENST00000604441 183 ntBASIC4.32□□□□□ -1.72
PTCD2Q8WV60 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD2Q8WV60 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 MIR513A2-201ENST00000385249 127 ntBASIC4.31□□□□□ -1.72
PTCD2Q8WV60 MIR889-201ENST00000401280 79 ntBASIC4.31□□□□□ -1.72
PTCD2Q8WV60 AC091167.1-201ENST00000492017 396 ntBASIC4.31□□□□□ -1.72
PTCD2Q8WV60 AC093259.1-201ENST00000509755 300 ntBASIC4.31□□□□□ -1.72
PTCD2Q8WV60 PHBP14-201ENST00000512887 367 ntBASIC4.31□□□□□ -1.72
PTCD2Q8WV60 RNA5SP73-201ENST00000516744 108 ntBASIC4.31□□□□□ -1.72
PTCD2Q8WV60 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 TVP23BP1-201ENST00000557500 617 ntBASIC4.31□□□□□ -1.72
PTCD2Q8WV60 CR392039.5-201ENST00000623201 510 ntBASIC4.31□□□□□ -1.72
PTCD2Q8WV60 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PTCD2Q8WV60 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 RNA5SP479-201ENST00000364858 117 ntBASIC4.3□□□□□ -1.72
PTCD2Q8WV60 RNU6-1083P-201ENST00000384022 107 ntBASIC4.3□□□□□ -1.72
PTCD2Q8WV60 Y_RNA.607-201ENST00000410597 98 ntBASIC4.3□□□□□ -1.72
PTCD2Q8WV60 RNU2-40P-201ENST00000410833 196 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms