Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RNA5SP54-201ENST00000516951 92 ntBASIC1.1□□□□□ -2.23
RNF139Q8WU17 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.1□□□□□ -2.23
RNF139Q8WU17 AL022345.2-201ENST00000606307 135 ntBASIC1.1□□□□□ -2.23
RNF139Q8WU17 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
RNF139Q8WU17 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
RNF139Q8WU17 SNORA33-201ENST00000363664 130 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 RNU6-1059P-201ENST00000363752 98 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 RNU6-245P-201ENST00000384020 107 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 RNU6-17P-201ENST00000384245 107 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 RNU6-18P-201ENST00000384527 107 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 MIR1277-201ENST00000408536 78 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 AC016909.1-201ENST00000415916 166 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.09□□□□□ -2.23
RNF139Q8WU17 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.09□□□□□ -2.23
RNF139Q8WU17 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.09□□□□□ -2.23
RNF139Q8WU17 RNU7-57P-201ENST00000459540 60 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 RNU4-49P-201ENST00000516080 140 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 CYCSP23-201ENST00000519781 313 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 AK6P2-201ENST00000549020 471 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.09□□□□□ -2.23
RNF139Q8WU17 MIR8070-201ENST00000616510 88 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 AC002553.4-201ENST00000616896 331 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 AL133216.2-202ENST00000634512 349 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 AC068137.4-201ENST00000638485 296 ntBASIC1.09□□□□□ -2.23
RNF139Q8WU17 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.24
RNF139Q8WU17 Y_RNA.319-201ENST00000365138 92 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 RNU6-842P-201ENST00000384269 107 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 Y_RNA.533-201ENST00000384596 114 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 MIR153-2-201ENST00000385225 87 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RNF139Q8WU17 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF139Q8WU17 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 USP9YP30-201ENST00000430729 455 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 HMGN2P34-201ENST00000437647 269 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 MTND4LP16-201ENST00000440828 295 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 RNU6-329P-201ENST00000459618 107 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 AC069439.1-201ENST00000494739 167 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 RNA5SP102-201ENST00000516865 106 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.08□□□□□ -2.24
RNF139Q8WU17 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
RNF139Q8WU17 AC018638.8-201ENST00000588755 281 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 AC007014.2-201ENST00000615581 479 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 AC009248.2-201ENST00000619826 254 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 MTND4P12-201ENST00000498999 1377 ntBASIC1.08□□□□□ -2.24
RNF139Q8WU17 Y_RNA.86-201ENST00000363020 111 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 RNU6-137P-201ENST00000363680 108 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 RNU6-873P-201ENST00000363833 107 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 RNU6-595P-201ENST00000363944 107 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 Y_RNA.287-201ENST00000364853 94 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 RNU6-1013P-201ENST00000384180 107 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 RNU6-159P-201ENST00000391080 106 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 MIR320B2-201ENST00000408479 138 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 AL445305.1-201ENST00000432577 575 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 MTND1P4-201ENST00000435196 415 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 RPL39P38-201ENST00000467018 153 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.07□□□□□ -2.24
RNF139Q8WU17 SNORA25.14-201ENST00000516481 132 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 RNU1-117P-201ENST00000517041 158 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.07□□□□□ -2.24
RNF139Q8WU17 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.07□□□□□ -2.24
RNF139Q8WU17 AC136932.1-201ENST00000574771 208 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 AC139792.2-201ENST00000624218 587 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 AL078596.1-201ENST00000624856 447 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.07□□□□□ -2.24
RNF139Q8WU17 snoZ196.1-201ENST00000625269 89 ntBASIC1.07□□□□□ -2.24
RNF139Q8WU17 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 SNORD87-201ENST00000364849 89 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 SNORA4.2-201ENST00000365313 147 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 AL356776.1-201ENST00000406574 447 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 MIR1253-201ENST00000408273 105 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 RNU6-57P-201ENST00000411348 103 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.06□□□□□ -2.24
RNF139Q8WU17 RPL30P16-201ENST00000419341 429 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.06□□□□□ -2.24
RNF139Q8WU17 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 SNORD5.1-201ENST00000458800 75 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 RNU6-221P-201ENST00000459541 99 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 MTND5P5-201ENST00000503764 376 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
RNF139Q8WU17 RNU6-1198P-201ENST00000516904 67 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 AC025647.1-201ENST00000517879 253 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 AF235103.2-201ENST00000525753 346 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 UBL5P4-201ENST00000562584 236 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 MIR4742-201ENST00000581069 85 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 MIR4661-201ENST00000582720 75 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 MIR4273-201ENST00000582824 84 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.06□□□□□ -2.24
RNF139Q8WU17 AC068790.6-201ENST00000602558 258 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 SNORD11B-201ENST00000607707 90 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 MIR6128-201ENST00000615528 109 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 AC006001.4-201ENST00000622243 395 ntBASIC1.06□□□□□ -2.24
RNF139Q8WU17 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RNF139Q8WU17 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
RNF139Q8WU17 SNORA25.9-201ENST00000365087 128 ntBASIC1.05□□□□□ -2.24
RNF139Q8WU17 Y_RNA.405-201ENST00000383979 100 ntBASIC1.05□□□□□ -2.24
RNF139Q8WU17 Y_RNA.451-201ENST00000384200 100 ntBASIC1.05□□□□□ -2.24
RNF139Q8WU17 Y_RNA.524-201ENST00000384564 100 ntBASIC1.05□□□□□ -2.24
RNF139Q8WU17 Y_RNA.561-201ENST00000384694 100 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms