Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MIR330-201ENST00000362196 94 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 SNORD87-201ENST00000364849 89 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 RNU6-996P-201ENST00000365438 107 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 RNU6-245P-201ENST00000384020 107 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 FABP5P4-201ENST00000437203 171 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AC093850.1-201ENST00000454121 251 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AC245047.8-201ENST00000456455 284 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 OR9P1P-201ENST00000496431 281 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AC091133.4-201ENST00000511142 308 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 RNA5SP54-201ENST00000516951 92 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AC027419.1-201ENST00000522976 328 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AC234772.3-201ENST00000602277 528 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 MIR8076-201ENST00000611401 83 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AL391903.3-201ENST00000612158 163 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AC103705.1-201ENST00000619013 241 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 AC005609.4-201ENST00000625071 447 ntBASIC0.41□□□□□ -2.34
CCDC112Q8NEF3 U3.8-201ENST00000363675 217 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 RNU6-137P-201ENST00000363680 108 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 SNORD115-8-201ENST00000363856 82 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 SNORD115-38-201ENST00000365037 82 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 RNY3P10-201ENST00000384764 102 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 SNORA70.12-201ENST00000516084 153 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AL157687.1-201ENST00000554853 619 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AC012557.2-201ENST00000605919 418 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AC091925.1-201ENST00000623204 462 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 AC007494.3-201ENST00000624660 743 ntBASIC0.4□□□□□ -2.35
CCDC112Q8NEF3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 RNU6-716P-201ENST00000365621 103 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 MT-TH-201ENST00000387441 69 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 RNA5SP511-201ENST00000410487 115 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 RNU6-325P-201ENST00000411132 105 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 AL358934.1-201ENST00000432346 324 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 MTCO2P7-201ENST00000446518 666 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 MTCO2P18-201ENST00000457151 658 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 TPTE2P5-203ENST00000458118 728 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 RNU7-63P-201ENST00000459054 62 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 MTCO3P38-201ENST00000468910 766 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 RNU6-189P-201ENST00000516120 101 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 AC087683.1-201ENST00000591187 441 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 AC134026.1-201ENST00000623249 2239 ntBASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
CCDC112Q8NEF3 RNU6-82P-201ENST00000363970 107 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 Y_RNA.201-201ENST00000364052 96 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 RNU5A-2P-201ENST00000384337 116 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 LINC01399-202ENST00000458450 244 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 SNORD65B-201ENST00000459126 73 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 RNA5SP330-201ENST00000517096 96 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 MIR4438-201ENST00000585271 93 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 MIR5692C1-201ENST00000585309 91 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 AL117336.2-201ENST00000602435 335 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 AC017083.3-201ENST00000609955 700 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 AL360219.1-201ENST00000610230 366 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 AC068787.1-201ENST00000623908 691 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 MIR6079-201ENST00000635807 62 ntBASIC0.38□□□□□ -2.35
CCDC112Q8NEF3 MIRLET7C-201ENST00000362160 84 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 RNY3P9-201ENST00000384727 106 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 RNU6-1158P-201ENST00000391167 107 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AL606923.1-201ENST00000406616 190 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC104332.1-201ENST00000440471 797 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC233266.1-201ENST00000454518 96 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 RNU6-58P-201ENST00000517143 103 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AP001372.4-201ENST00000524889 472 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AL118558.2-201ENST00000556294 238 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 MTND1P15-201ENST00000579262 949 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 MIR3192-201ENST00000584920 77 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC027449.1-201ENST00000608890 407 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC242852.1-201ENST00000612151 96 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AL354950.2-201ENST00000617939 290 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC072046.2-201ENST00000618366 268 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 AC022960.3-201ENST00000619794 441 ntBASIC0.37□□□□□ -2.35
CCDC112Q8NEF3 MTND4P12-201ENST00000498999 1377 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 AC005592.1-201ENST00000566527 1640 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms