Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 Z82188.1-201ENST00000436709 154 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 SNORD65B-201ENST00000459126 73 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 SNORA68.3-201ENST00000515906 83 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 RN7SKP12-201ENST00000516275 143 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 SCARNA1-201ENST00000517138 166 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC087854.1-201ENST00000519706 414 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC023157.2-201ENST00000540596 141 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC008536.2-201ENST00000607284 349 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AL121757.2-201ENST00000611223 313 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC122133.1-201ENST00000613964 233 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 AC006435.5-201ENST00000624486 112 ntBASIC0.25□□□□□ -2.37
ZNF439Q8NDP4 SNORD115-8-201ENST00000363856 82 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.796-201ENST00000364268 102 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.799-201ENST00000364992 102 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 SNORD115-38-201ENST00000365037 82 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.415-201ENST00000384012 112 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 RNU6-784P-201ENST00000384330 106 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 RNU1-119P-201ENST00000391122 165 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 RNU6-325P-201ENST00000411132 105 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 AC093019.1-201ENST00000443135 252 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 MTCO3P38-201ENST00000468910 766 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 RNU7-12P-201ENST00000516030 62 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1198P-201ENST00000516904 67 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1116P-201ENST00000517269 99 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 MTND4P7-201ENST00000523876 130 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 AL157687.1-201ENST00000554853 619 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 AC023827.1-201ENST00000569247 97 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 MIR4438-201ENST00000585271 93 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 MIR5692C1-201ENST00000585309 91 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 AC234772.3-201ENST00000602277 528 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 MIR6079-201ENST00000635807 62 ntBASIC0.24□□□□□ -2.37
ZNF439Q8NDP4 AL390237.1-201ENST00000404226 1415 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 MTND4P12-201ENST00000498999 1377 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 FGF7P2-201ENST00000332473 296 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 SNORD50.1-201ENST00000362987 71 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 RNU6-727P-201ENST00000363592 107 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.201-201ENST00000364052 96 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 RNU6-996P-201ENST00000365438 107 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 MIR521-1-201ENST00000384902 87 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 MT-TH-201ENST00000387441 69 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 RNU6-1158P-201ENST00000391167 107 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AC244098.3-201ENST00000424803 96 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 RPL23AP50-201ENST00000434149 455 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 MTCO1P19-201ENST00000443487 500 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 TPTE2P5-203ENST00000458118 728 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 snoU13.18-201ENST00000459483 104 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 HMGN2P26-201ENST00000463169 339 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AC107401.1-201ENST00000503426 685 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 RNA5SP436-201ENST00000516020 115 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 SNORD111.1-201ENST00000516421 86 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 MTND4LP26-201ENST00000518144 282 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AP001372.4-201ENST00000524889 472 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AP003716.2-201ENST00000528260 108 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AC027288.2-201ENST00000553028 243 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AC131055.1-201ENST00000584626 316 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 MIR8076-201ENST00000611401 83 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AL136317.1-201ENST00000612653 226 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AC103705.1-201ENST00000619013 241 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 AL158209.2-201ENST00000619266 216 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 MIR6515-201ENST00000619843 57 ntBASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.23□□□□□ -2.37
ZNF439Q8NDP4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 MTND5P16-201ENST00000460269 1703 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 RNA5SP264-201ENST00000363115 107 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 Y_RNA.378-201ENST00000365652 113 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 RNY3P9-201ENST00000384727 106 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 RNY3P10-201ENST00000384764 102 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 RNA5SP482-201ENST00000391269 118 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 SNORA26.8-201ENST00000391306 124 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 MTATP6P19-201ENST00000413797 659 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 AL353193.1-201ENST00000421444 268 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 MRPS10P1-201ENST00000448483 130 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 AC010469.2-201ENST00000496412 480 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 MTND1P22-201ENST00000510572 951 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 RNU6-189P-201ENST00000516120 101 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.22□□□□□ -2.37
ZNF439Q8NDP4 SNORA25.14-201ENST00000516481 132 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms