Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Y_RNA.145-201ENST00000363527 102 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 Y_RNA.276-201ENST00000364732 109 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 MIR1253-201ENST00000408273 105 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 DPH3P2-201ENST00000422618 250 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 RNU6-1143P-201ENST00000516125 104 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 SNORA40.15-201ENST00000516884 107 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 MIR4648-201ENST00000580107 72 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 AC005786.1-201ENST00000588553 154 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 MIR6715A-201ENST00000615929 79 ntBASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.72□□□□□ -1.97
PRPF38AQ8NAV1 Y_RNA.183-201ENST00000363882 113 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 IGLV3-17-201ENST00000519099 244 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 MIR1273D-201ENST00000577266 86 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 MIR5007-201ENST00000583098 95 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 AL353149.1-201ENST00000610667 244 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 AC004467.1-201ENST00000615678 330 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 AC006001.4-201ENST00000622243 395 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 AC006435.5-201ENST00000624486 112 ntBASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PRPF38AQ8NAV1 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 SNORD63-201ENST00000384262 68 ntBASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 AC005002.2-201ENST00000438228 269 ntBASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 RPS12P2-201ENST00000439728 269 ntBASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 AC011406.1-201ENST00000512440 370 ntBASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 Y_RNA.720-201ENST00000517166 92 ntBASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRPF38AQ8NAV1 MTND5P6-201ENST00000422338 1798 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 RNU1-51P-201ENST00000365345 176 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 SNORA11.4-201ENST00000408823 129 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 RPL23AP36-201ENST00000413895 458 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 snoU13.15-201ENST00000459407 104 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 RNU6-1137P-201ENST00000517073 99 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 AC131281.1-201ENST00000522984 164 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 AC008749.1-201ENST00000597650 306 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 U1.36-201ENST00000620684 176 ntBASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRPF38AQ8NAV1 Y_RNA.162-201ENST00000363683 102 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 MIR515-2-201ENST00000384883 83 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 MIR515-1-201ENST00000384884 83 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 AC060773.1-201ENST00000421698 310 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 MTND2P29-201ENST00000438595 412 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 snoU13.26-201ENST00000459452 105 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 AC010598.1-201ENST00000510378 103 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 MIR4423-201ENST00000580922 80 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 RAC1P9-201ENST00000604990 392 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 PART1_1.1-201ENST00000611761 217 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 AC091932.3-201ENST00000624223 323 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 AC022513.1-201ENST00000624512 117 ntBASIC2.68□□□□□ -1.98
PRPF38AQ8NAV1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 Y_RNA.143-201ENST00000363520 106 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 RNU6-271P-201ENST00000363858 105 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 SNORA63C-201ENST00000364578 129 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 RNU6-738P-201ENST00000384531 106 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 Y_RNA.570-201ENST00000384750 101 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 RNU2-54P-201ENST00000410299 190 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 AC096920.1-201ENST00000423991 241 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 SCARNA15.1-201ENST00000516384 125 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 RNU6-897P-201ENST00000517135 105 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 AC011373.1-201ENST00000607270 237 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.15-201ENST00000611544 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.16-201ENST00000613119 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.12-201ENST00000613778 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.20-201ENST00000613956 192 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.9-201ENST00000615427 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.11-201ENST00000616345 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.2-201ENST00000616535 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.3-201ENST00000617785 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.19-201ENST00000618602 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 RNU2-1-201ENST00000618664 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.6-201ENST00000619225 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.5-201ENST00000619465 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 U2.10-201ENST00000620268 191 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 AC099654.10-201ENST00000640395 161 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 AC245060.5-201ENST00000610778 3293 ntBASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.67□□□□□ -1.98
PRPF38AQ8NAV1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 Y_RNA.210-201ENST00000364161 110 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 RNU6-1175P-201ENST00000365200 107 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 RNU6-130P-201ENST00000411112 103 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 AC010154.1-201ENST00000425857 269 ntBASIC2.66□□□□□ -1.98
PRPF38AQ8NAV1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms