Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RNU1-131P-201ENST00000458943 161 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 Y_RNA.635-201ENST00000459041 101 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 MTND5P5-201ENST00000503764 376 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 Y_RNA.708-201ENST00000516950 96 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 AP005660.1-201ENST00000522972 293 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 RRN3P3-201ENST00000549207 578 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 MIR3169-201ENST00000578032 83 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 MIR4753-201ENST00000585119 83 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 AL353149.1-201ENST00000610667 244 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 AL627230.6-201ENST00000611129 280 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 AL355073.2-201ENST00000612106 557 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 AC068205.3-201ENST00000636385 468 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 AP000648.3-201ENST00000623539 4507 ntBASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.11□□□□□ -2.23
COL27A1Q8IZC6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 Y_RNA.160-201ENST00000363677 92 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 RNU6-414P-201ENST00000363705 104 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 SNORA67.2-201ENST00000384300 149 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 SNORD116-29-201ENST00000384516 83 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 Y_RNA.594-201ENST00000410373 140 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 EBAG9P1-201ENST00000418955 543 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 RPL23AP50-201ENST00000434149 455 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 RNU7-57P-201ENST00000459540 60 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AC010531.2-201ENST00000465012 153 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 HMGN1P13-201ENST00000505795 138 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 RNU2-34P-201ENST00000516534 121 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 SNORA44.1-201ENST00000517031 108 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 CBX3P8-201ENST00000532412 525 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AC090617.3-201ENST00000573670 475 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 FAM106DP-201ENST00000586416 501 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AC005786.1-201ENST00000588553 154 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AL109918.3-201ENST00000603072 338 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 AL078604.3-201ENST00000615580 211 ntBASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
COL27A1Q8IZC6 RNU6-99P-201ENST00000364721 107 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 Y_RNA.319-201ENST00000365138 92 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 RNU6-975P-201ENST00000384296 105 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 RNU6-342P-201ENST00000384521 104 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 SNORA69.1-201ENST00000390904 137 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 MIR934-201ENST00000401241 83 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 FTH1P12-201ENST00000432137 551 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 MTND2P29-201ENST00000438595 412 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 PCNPP5-201ENST00000452246 481 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 MTCO3P8-201ENST00000453691 755 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 RNU7-94P-201ENST00000459576 63 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 HMGN2P9-201ENST00000476875 229 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 RPL30P10-201ENST00000488148 337 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 AL163195.1-201ENST00000496941 348 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 Y_RNA.718-201ENST00000517110 102 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 AC022254.1-201ENST00000567857 235 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 SNORD11B-201ENST00000607707 90 ntBASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
COL27A1Q8IZC6 Y_RNA.142-201ENST00000363491 102 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 Y_RNA.387-201ENST00000383918 102 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 RNU6-281P-201ENST00000384212 103 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 MIR549A-201ENST00000385268 96 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 PDCL2P1-201ENST00000419302 352 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AC236972.2-201ENST00000434979 310 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AC069257.2-201ENST00000441819 155 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 RNU7-152P-201ENST00000458982 64 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 HMGB3P17-201ENST00000504195 649 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 RNU6-875P-201ENST00000516488 106 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AC011604.1-201ENST00000545978 196 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AC233702.2-202ENST00000562547 291 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AC004584.2-201ENST00000570407 410 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 AL096840.1-201ENST00000603287 93 ntBASIC1.09□□□□□ -2.24
COL27A1Q8IZC6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 RNU1-62P-201ENST00000362599 164 ntBASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 RNY3P14-201ENST00000384309 102 ntBASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 RNU1-139P-201ENST00000391307 165 ntBASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 MIR1253-201ENST00000408273 105 ntBASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 MIR1267-201ENST00000408723 78 ntBASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 USP9YP16-201ENST00000430287 407 ntBASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 USP9YP23-201ENST00000455085 407 ntBASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.08□□□□□ -2.24
COL27A1Q8IZC6 RPL7P42-201ENST00000481005 679 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms