Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 AC242852.1-201ENST00000612151 96 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 AC134878.1-201ENST00000619901 243 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 AC006111.3-201ENST00000622137 383 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 AC244015.1-201ENST00000622301 99 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 AC068724.3-201ENST00000625906 87 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 MIR494-201ENST00000349529 81 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 RNU1-72P-201ENST00000362976 153 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 RNA5SP399-201ENST00000364003 117 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 SNORA70C-201ENST00000384538 135 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 SNORA57.1-201ENST00000391227 145 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 AL356095.1-201ENST00000417217 199 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 AC022217.4-201ENST00000604389 163 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 MIR92B-201ENST00000607575 96 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 MIR6867-201ENST00000610636 67 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 MIR492-201ENST00000638676 116 ntBASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC116Q8IYX3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 MIR302B-201ENST00000362188 73 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 RNU1-105P-201ENST00000363470 161 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 Y_RNA.242-201ENST00000364473 110 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 Y_RNA.344-201ENST00000365381 112 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 SNORD78.1-201ENST00000390866 65 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 RNU6-1186P-201ENST00000410429 97 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 AC109327.2-201ENST00000448339 378 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 AL031183.1-201ENST00000457667 207 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 AC107297.1-201ENST00000459991 176 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 AP001486.1-201ENST00000463339 476 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 AC026726.1-201ENST00000512859 601 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 RNU6-1291P-201ENST00000516591 104 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 RNA5SP179-201ENST00000517284 121 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 AC091167.4-201ENST00000605079 184 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 U2.20-201ENST00000613956 192 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 U7.8-201ENST00000619968 63 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 MAPK10-253ENST00000641010 4072 ntBASIC3.73□□□□□ -1.81
CCDC116Q8IYX3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 Y_RNA.219-201ENST00000364232 113 ntBASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 RNU6-1134P-201ENST00000365156 101 ntBASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 Y_RNA.342-201ENST00000365352 113 ntBASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 SNORA4.4-201ENST00000515921 135 ntBASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 RN7SKP209-201ENST00000516888 304 ntBASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 MIR3160-1-201ENST00000577972 85 ntBASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 AC021443.1-201ENST00000604478 211 ntBASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 SNORA50A-202ENST00000629536 136 ntBASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC116Q8IYX3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RNU6-349P-201ENST00000362402 107 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 Y_RNA.93-201ENST00000363066 109 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RNU1-96P-201ENST00000364163 162 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 Y_RNA.298-201ENST00000364960 107 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RNA5SP317-201ENST00000410176 116 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RNA5SP311-201ENST00000411290 116 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RPS15AP28-201ENST00000435088 386 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 HMGN2P34-201ENST00000437647 269 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 PGBD4P5-201ENST00000445958 426 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RPS26P15-201ENST00000488067 348 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RNA5SP315-201ENST00000516340 116 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 RNA5SP312-201ENST00000517068 116 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 AC026421.1-201ENST00000519101 163 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 SUMO2P16-201ENST00000519475 264 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 AC087685.1-201ENST00000587507 141 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 AL590808.1-201ENST00000618696 141 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 AC015726.2-201ENST00000620112 122 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 CR392039.5-201ENST00000623201 510 ntBASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC116Q8IYX3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 566 ms