Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SNORA33-201ENST00000363664 130 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 RNU6-338P-201ENST00000383888 105 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 RNY3P4-201ENST00000384428 101 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 SNORD116-29-201ENST00000384516 83 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 MT-TD-201ENST00000387419 68 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 RNA5SP467-201ENST00000391274 118 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 SNORD12B-201ENST00000410433 91 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 MTCO3P19-201ENST00000415864 321 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 AL163195.1-201ENST00000496941 348 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 AL117351.2-201ENST00000513571 157 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 CBX3P4-201ENST00000538909 354 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 AL442163.3-201ENST00000554110 156 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 AL355375.2-201ENST00000574825 175 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 MIR4709-201ENST00000577272 72 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 MIR4422-201ENST00000581938 83 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 MIR3935-201ENST00000583472 104 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 MIR4438-201ENST00000585271 93 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 AL357075.2-201ENST00000614906 189 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 MIR3674-201ENST00000636576 68 ntBASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LINC00346Q8IVM7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 SNORD33-201ENST00000362761 85 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 Y_RNA.500-201ENST00000384466 111 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 MIR562-201ENST00000384894 95 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 MIR559-201ENST00000385188 96 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 RNA5SP475-201ENST00000410568 110 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 RPL31P63-201ENST00000422565 375 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 RAB28P5-201ENST00000427490 651 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 HSPE1P21-201ENST00000438283 308 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 AC073910.1-201ENST00000445047 438 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 MTND4LP32-201ENST00000636111 270 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 U6.108-201ENST00000637764 58 ntBASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
LINC00346Q8IVM7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 Y_RNA.187-201ENST00000363918 113 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 MIR628-201ENST00000385229 95 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 SUMO2P12-201ENST00000405924 140 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 Y_RNA.605-201ENST00000410577 105 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 FCF1P4-201ENST00000448326 183 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 SNORD19B-201ENST00000459623 84 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 RNU7-128P-201ENST00000517247 62 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 SNORA77B-201ENST00000578179 125 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 AL138825.1-201ENST00000618587 192 ntBASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LINC00346Q8IVM7 SNORD78.2-201ENST00000391076 69 ntBASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 RN7SKP192-201ENST00000411291 327 ntBASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 Y_RNA.632-201ENST00000459189 102 ntBASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 RPS27P22-201ENST00000478056 241 ntBASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 AC091544.4-201ENST00000555268 342 ntBASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 AC016925.2-201ENST00000605108 242 ntBASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 AC005828.6-201ENST00000606610 232 ntBASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LINC00346Q8IVM7 Y_RNA.428-201ENST00000384078 102 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 RNY3P14-201ENST00000384309 102 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 RNU6-1186P-201ENST00000410429 97 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 RN7SKP200-201ENST00000410564 320 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AC245517.4-201ENST00000448601 281 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 RPS27P1-201ENST00000450552 247 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AC105758.1-201ENST00000506038 399 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AC097462.1-201ENST00000514125 324 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 AL162424.1-201ENST00000602325 221 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 U2.1-201ENST00000618978 145 ntBASIC1.66□□□□□ -2.14
LINC00346Q8IVM7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
LINC00346Q8IVM7 AC100821.1-201ENST00000523153 2479 ntBASIC1.65□□□□□ -2.14
LINC00346Q8IVM7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LINC00346Q8IVM7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
LINC00346Q8IVM7 SNORA27.1-201ENST00000362604 124 ntBASIC1.65□□□□□ -2.15
LINC00346Q8IVM7 U8.2-201ENST00000363156 134 ntBASIC1.65□□□□□ -2.15
LINC00346Q8IVM7 Y_RNA.146-201ENST00000363549 102 ntBASIC1.65□□□□□ -2.15
LINC00346Q8IVM7 RNU4-42P-201ENST00000364738 142 ntBASIC1.65□□□□□ -2.15
LINC00346Q8IVM7 Y_RNA.314-201ENST00000365114 102 ntBASIC1.65□□□□□ -2.15
LINC00346Q8IVM7 Y_RNA.356-201ENST00000365475 113 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms