Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SNORD65B-201ENST00000459126 73 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 AC092991.1-201ENST00000477176 376 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 RNU6-1314P-201ENST00000517139 104 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 AC023157.2-201ENST00000540596 141 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 RAB11AP2-201ENST00000545905 639 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 AL137100.2-201ENST00000555786 315 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 MIR4273-201ENST00000582824 84 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 AC018630.2-201ENST00000534866 2403 ntBASIC1.08□□□□□ -2.24
CCDC50Q8IVM0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 MRPL42P3-201ENST00000401492 326 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 USP9YP30-201ENST00000430729 455 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 RNU6-864P-201ENST00000516256 108 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 RNU7-99P-201ENST00000516271 62 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 MIR4769-201ENST00000584126 77 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 AC022432.1-201ENST00000595739 310 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 AC080013.6-201ENST00000606185 215 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 AC015540.1-201ENST00000615828 501 ntBASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC50Q8IVM0 RNY4P14-201ENST00000363656 96 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 RNU6-137P-201ENST00000363680 108 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 RNU6-280P-201ENST00000364145 104 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 RNU6-842P-201ENST00000384269 107 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.473-201ENST00000384333 102 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 MTND3P23-201ENST00000431980 347 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 AC093303.1-201ENST00000514549 295 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 RNU7-175P-201ENST00000515915 61 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 RNU6-107P-201ENST00000516643 102 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 AC134698.4-201ENST00000523451 826 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 AL590705.4-201ENST00000532209 134 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 MIR4778-201ENST00000577635 80 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 MIR4438-201ENST00000585271 93 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 AC010999.1-201ENST00000611856 324 ntBASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC50Q8IVM0 RNU6-1266P-201ENST00000362794 105 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.89-201ENST00000363031 102 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 RNU6-595P-201ENST00000363944 107 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 RNU6-505P-201ENST00000384427 107 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 RNU6-950P-201ENST00000384651 107 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 AC010469.2-201ENST00000496412 480 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 RNA5SP458-201ENST00000516188 119 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 RNU6-922P-201ENST00000516753 99 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 AC012557.2-201ENST00000605919 418 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 MIR6128-201ENST00000615528 109 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 AC099654.5-201ENST00000636479 350 ntBASIC1.05□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.184-201ENST00000363884 108 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 RNU6-53P-201ENST00000365367 106 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.450-201ENST00000384198 113 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 RNU6-281P-201ENST00000384212 103 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 MIR181A1-201ENST00000385026 110 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 MTND3P21-201ENST00000433774 331 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 STAG3L5P-204ENST00000443759 179 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 RPL39P38-201ENST00000467018 153 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 RPS27P22-201ENST00000478056 241 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 RNU6-566P-201ENST00000516790 107 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 CBX3P8-201ENST00000532412 525 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 AC004584.2-201ENST00000570407 410 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 SNORD3E-202ENST00000627253 216 ntBASIC1.04□□□□□ -2.24
CCDC50Q8IVM0 ZNF299P-201ENST00000406845 1804 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.3-201ENST00000362331 103 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.9-201ENST00000362354 101 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.106-201ENST00000363189 100 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 RNU4-12P-201ENST00000365233 139 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 RNU6-373P-201ENST00000411247 98 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 MTATP6P26-201ENST00000445926 662 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 MRPS10P1-201ENST00000448483 130 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 COX6CP14-201ENST00000469580 174 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 AL163540.1-201ENST00000485382 386 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 7SK.7-201ENST00000603504 247 ntBASIC1.03□□□□□ -2.24
CCDC50Q8IVM0 Y_RNA.295-201ENST00000364918 102 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 Y_RNA.301-201ENST00000364990 103 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 RNU6-596P-201ENST00000365395 98 ntBASIC1.02□□□□□ -2.25
CCDC50Q8IVM0 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms