Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.16-201ENST00000362421 102 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.152-201ENST00000363578 100 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.183-201ENST00000363882 113 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 RNU6-1305P-201ENST00000364353 104 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 RNU6-20P-201ENST00000384106 107 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 MRPL35P1-201ENST00000404272 572 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 MIR1262-201ENST00000408276 93 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AC016717.1-201ENST00000448918 286 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 RNA5SP490-201ENST00000517141 136 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AC023157.2-201ENST00000540596 141 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AC004817.2-201ENST00000561794 651 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 MIR4300-201ENST00000581016 96 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AL109918.3-201ENST00000603072 338 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AC010900.2-201ENST00000604508 210 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AC008873.1-201ENST00000625051 138 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 MTND5P6-201ENST00000422338 1798 ntBASIC1.8□□□□□ -2.12
LRRTM1Q86UE6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 RNA5SP289-201ENST00000362332 137 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.84-201ENST00000363011 104 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 RNU6-626P-201ENST00000363354 107 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.276-201ENST00000364732 109 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.286-201ENST00000364813 102 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 RNU6-418P-201ENST00000384035 107 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.439-201ENST00000384119 94 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.477-201ENST00000384352 108 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.526-201ENST00000384572 110 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 SNORD115-46-201ENST00000390982 71 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 AL355497.1-201ENST00000406262 551 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 MIR1302-3-201ENST00000408128 138 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 MIR320B2-201ENST00000408479 138 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 MIR1283-1-201ENST00000408494 87 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 RNU4-30P-201ENST00000410245 143 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.602-201ENST00000410535 92 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 EDDM3CP-201ENST00000415977 425 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 RAB28P5-201ENST00000427490 651 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 AC005002.2-201ENST00000438228 269 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 RNU6-625P-201ENST00000459412 107 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 AC093259.1-201ENST00000509755 300 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 MIR3126-201ENST00000577443 74 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 AC012640.5-201ENST00000623897 319 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 AC010615.1-201ENST00000594254 1764 ntBASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.101-201ENST00000363154 102 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 RNU6-454P-201ENST00000364292 107 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 SNORD31B-201ENST00000364977 69 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 Y_RNA.541-201ENST00000384640 113 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 RNU6-713P-201ENST00000384761 107 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 RPL23AP3-201ENST00000453844 468 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 PRELID3BP1-201ENST00000457142 540 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AC016925.1-201ENST00000458303 298 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 SNORD127-201ENST00000458892 86 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AC010531.2-201ENST00000465012 153 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AC025465.3-201ENST00000510570 311 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 RNU6-107P-201ENST00000516643 102 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 RNU7-193P-201ENST00000516723 65 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 RNU6-1271P-201ENST00000517049 105 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 MIR3162-201ENST00000581818 82 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AC012433.1-201ENST00000588916 398 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AC062037.2-201ENST00000610137 73 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AP001282.2-201ENST00000616149 309 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 AC091932.3-201ENST00000624223 323 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 IGHVIII-44-202ENST00000636235 289 ntBASIC1.78□□□□□ -2.12
LRRTM1Q86UE6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
LRRTM1Q86UE6 AL359851.1-201ENST00000569460 4997 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 SNORD113-8-201ENST00000363497 74 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 RNU6-379P-201ENST00000363813 104 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 Y_RNA.332-201ENST00000365271 113 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 Y_RNA.401-201ENST00000383965 117 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 Y_RNA.447-201ENST00000384184 113 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 SNORD14D-201ENST00000384390 87 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 Y_RNA.498-201ENST00000384460 102 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 Y_RNA.500-201ENST00000384466 111 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 MIR586-201ENST00000385035 97 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 MIR1302-6-201ENST00000408466 90 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 RNU2-40P-201ENST00000410833 196 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.77□□□□□ -2.13
LRRTM1Q86UE6 RNU6-1132P-201ENST00000459214 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms