Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU6-1115P-201ENST00000362490 106 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 RNU6-1019P-201ENST00000364424 107 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 Y_RNA.315-201ENST00000365117 102 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 Y_RNA.498-201ENST00000384460 102 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 RNU6-417P-201ENST00000384712 107 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 MIR515-2-201ENST00000384883 83 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 MIR515-1-201ENST00000384884 83 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 MIR9-3-201ENST00000385084 90 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 AC010409.1-201ENST00000487382 476 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 HMGB3P17-201ENST00000504195 649 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 AC018448.1-201ENST00000552843 316 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 U2.1-201ENST00000618978 145 ntBASIC1.81□□□□□ -2.12
LDB1Q86U70 RNU6-112P-201ENST00000363599 104 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 RNY3P11-201ENST00000364153 102 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 RNU4-42P-201ENST00000364738 142 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 Y_RNA.287-201ENST00000364853 94 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 SNORA72.2-201ENST00000365028 127 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 MIR628-201ENST00000385229 95 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LDB1Q86U70 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.8□□□□□ -2.12
LDB1Q86U70 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 SNORA40.9-201ENST00000515895 93 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 RNU6-976P-201ENST00000516086 111 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 AC084364.2-201ENST00000546924 395 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 AL442163.3-201ENST00000554110 156 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 AL133255.1-201ENST00000606374 441 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 AC138305.3-201ENST00000624988 240 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 AC010615.1-201ENST00000594254 1764 ntBASIC1.8□□□□□ -2.12
LDB1Q86U70 Y_RNA.431-201ENST00000384086 102 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 RNY3P4-201ENST00000384428 101 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 Y_RNA.579-201ENST00000390939 94 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 MIR1289-2-201ENST00000408360 111 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 Y_RNA.604-201ENST00000410574 102 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.79□□□□□ -2.12
LDB1Q86U70 AC069257.2-201ENST00000441819 155 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 RNU6-625P-201ENST00000459412 107 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 AC027575.1-201ENST00000481064 460 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.79□□□□□ -2.12
LDB1Q86U70 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.79□□□□□ -2.12
LDB1Q86U70 AC022432.1-201ENST00000595739 310 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 C8orf59P2-201ENST00000603441 271 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.79□□□□□ -2.12
LDB1Q86U70 AC091925.1-201ENST00000623204 462 ntBASIC1.79□□□□□ -2.12
LDB1Q86U70 MIR410-201ENST00000362222 80 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 Y_RNA.252-201ENST00000364556 101 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 Y_RNA.509-201ENST00000384506 99 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 RNU6-296P-201ENST00000384608 107 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 MIR520A-201ENST00000384862 85 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.78□□□□□ -2.12
LDB1Q86U70 AC245047.4-201ENST00000433189 144 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.78□□□□□ -2.12
LDB1Q86U70 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.78□□□□□ -2.12
LDB1Q86U70 SNORA31.17-201ENST00000516953 127 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 AC024995.1-201ENST00000523014 93 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.78□□□□□ -2.12
LDB1Q86U70 MIR3684-201ENST00000579779 74 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 VN1R91P-201ENST00000594377 169 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
LDB1Q86U70 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
LDB1Q86U70 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LDB1Q86U70 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
LDB1Q86U70 Y_RNA.197-201ENST00000364004 102 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 RNU6-1310P-201ENST00000384153 107 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 MIR504-201ENST00000385065 83 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 RNA5SP467-201ENST00000391274 118 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 RNA5SP475-201ENST00000410568 110 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 EBAG9P1-201ENST00000418955 543 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 RAB28P5-201ENST00000427490 651 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 FCF1P4-201ENST00000448326 183 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.77□□□□□ -2.13
LDB1Q86U70 SNORD65B-201ENST00000459126 73 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.77□□□□□ -2.13
LDB1Q86U70 RNU6-1170P-201ENST00000515974 106 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 Y_RNA.661-201ENST00000516003 99 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LDB1Q86U70 AL137100.2-201ENST00000555786 315 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 MIR6715A-201ENST00000615929 79 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 AC104985.2-201ENST00000620598 500 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 AC006435.5-201ENST00000624486 112 ntBASIC1.77□□□□□ -2.13
LDB1Q86U70 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
LDB1Q86U70 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
LDB1Q86U70 Y_RNA.5-201ENST00000362334 102 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 Y_RNA.496-201ENST00000384444 101 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 RNA5SP323-201ENST00000391094 133 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 RNU2-7P-201ENST00000410794 178 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 MTCO3P19-201ENST00000415864 321 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 AC096644.2-201ENST00000429278 159 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.76□□□□□ -2.13
LDB1Q86U70 AC010598.1-201ENST00000510378 103 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 AC006600.1-201ENST00000572529 153 ntBASIC1.76□□□□□ -2.13
LDB1Q86U70 AC104984.5-201ENST00000586878 94 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms