Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU4-41P-201ENST00000364426 143 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 SNORA67.2-201ENST00000384300 149 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 MIR562-201ENST00000384894 95 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 ELOCP21-201ENST00000412558 336 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 MTCO1P20-201ENST00000425366 358 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AC009237.7-201ENST00000447357 229 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AC091951.3-201ENST00000504093 246 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AC010424.1-201ENST00000506336 297 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AP002004.2-201ENST00000531656 154 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AC090617.3-201ENST00000573670 475 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 SNORD92-201ENST00000585078 85 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 AC138649.3-201ENST00000622154 254 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 Y_RNA.412-201ENST00000384001 104 ntBASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 MTND1P26-201ENST00000440488 538 ntBASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 AL353572.1-201ENST00000442490 417 ntBASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 AC046134.1-201ENST00000514454 666 ntBASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 AP000753.3-201ENST00000604083 169 ntBASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 AL109933.3-201ENST00000619095 188 ntBASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 AL078596.1-201ENST00000624856 447 ntBASIC-1.44□□□□□ -2.64
LINC00643Q86TS7 RNU5B-1-201ENST00000363286 116 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 RNY1-201ENST00000364228 113 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 RNA5SP205-201ENST00000364653 136 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 RNU6-481P-201ENST00000384194 107 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 Y_RNA.549-201ENST00000384657 102 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 MIR125B2-201ENST00000385128 89 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 MTCO1P17-201ENST00000411522 491 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 FCF1P9-201ENST00000412546 282 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 RPS26P42-201ENST00000413485 326 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 AC243428.1-201ENST00000421099 264 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 PIGPP3-201ENST00000425307 415 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 BTF3P11-201ENST00000426582 477 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 AC008628.2-201ENST00000502605 298 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 MIR4789-201ENST00000577469 82 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 uc_338.22-201ENST00000622722 187 ntBASIC-1.45□□□□□ -2.64
LINC00643Q86TS7 RNU6-137P-201ENST00000363680 108 ntBASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 MIR224-201ENST00000384889 81 ntBASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 RNU6-237P-201ENST00000515985 71 ntBASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 RNU7-156P-201ENST00000517214 74 ntBASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.46□□□□□ -2.64
LINC00643Q86TS7 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 RNU6-336P-201ENST00000364891 107 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 MIR548L-201ENST00000408303 86 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 RNU2-54P-201ENST00000410299 190 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AL031779.1-201ENST00000415663 330 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AL355994.1-201ENST00000424379 260 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AC107297.1-201ENST00000459991 176 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AC091885.1-201ENST00000506658 268 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 RNA5SP47-201ENST00000517230 109 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AC068587.5-201ENST00000528506 175 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AC018448.1-201ENST00000552843 316 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 AC138749.4-201ENST00000563970 127 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 MIR544B-201ENST00000582372 78 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 MIR4438-201ENST00000585271 93 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 U7.6-201ENST00000610841 64 ntBASIC-1.47□□□□□ -2.64
LINC00643Q86TS7 MIR101-2-201ENST00000362195 79 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 Y_RNA.85-201ENST00000363014 111 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 RNU6-777P-201ENST00000364265 104 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 SNORD83B-201ENST00000386745 93 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 MIR196A1-201ENST00000388006 70 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 MTCO2P33-201ENST00000402100 465 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 AC004866.1-201ENST00000411748 78 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 ELOCP17-201ENST00000414751 326 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 MTND4LP14-201ENST00000429447 288 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 Z98949.2-201ENST00000440996 144 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 SNORD123-201ENST00000459473 70 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 RNU6-341P-201ENST00000516973 96 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 RNA5SP454-201ENST00000517231 127 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 AC016597.2-201ENST00000613256 341 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 AC078880.5-201ENST00000617845 421 ntBASIC-1.48□□□□□ -2.65
LINC00643Q86TS7 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 Y_RNA.164-201ENST00000363709 102 ntBASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 RNU6-873P-201ENST00000363833 107 ntBASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 RNU6-960P-201ENST00000364056 120 ntBASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 U6.112-201ENST00000384129 70 ntBASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 SNORA27.4-201ENST00000516650 95 ntBASIC-1.49□□□□□ -2.65
LINC00643Q86TS7 LRRC34P1-201ENST00000542742 915 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms