Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.15□□□□□ -1.91
ATG4DQ86TL0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4DQ86TL0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4DQ86TL0 AL353746.1-201ENST00000566293 6881 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.486-201ENST00000384398 107 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.544-201ENST00000384650 113 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 RNVU1-14-201ENST00000384770 164 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 MIR184-201ENST00000384962 84 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 MIR590-201ENST00000385008 97 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 MIR607-201ENST00000385241 96 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 MIR147B-201ENST00000390185 80 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 SNORA11.1-201ENST00000408133 129 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 AC023449.1-201ENST00000454464 154 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.14□□□□□ -1.91
ATG4DQ86TL0 SNORD11-201ENST00000459124 84 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 AC112771.1-201ENST00000463581 102 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 AC025518.1-201ENST00000479856 347 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 RNA5SP236-201ENST00000516169 116 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 RNA5SP468-201ENST00000516782 93 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 AC012493.2-201ENST00000595083 291 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 AL161756.2-201ENST00000604597 246 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 PWAR6-201ENST00000552334 4618 ntBASIC3.14□□□□□ -1.91
ATG4DQ86TL0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATG4DQ86TL0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.14□□□□□ -1.91
ATG4DQ86TL0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AC026241.1-201ENST00000517873 2142 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 MIR30E-201ENST00000362104 92 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.366-201ENST00000365540 102 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 SNORA1-201ENST00000384107 130 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 SNORA19.1-201ENST00000410656 129 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AC016717.1-201ENST00000448918 286 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 RPL27AP5-201ENST00000469428 449 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 RN7SL807P-201ENST00000470923 297 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AC021205.2-201ENST00000480069 347 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 MIR449C-201ENST00000516047 92 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 RNU7-149P-201ENST00000516739 59 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AL365205.2-201ENST00000594586 68 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AC015726.2-201ENST00000620112 122 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AC002064.3-201ENST00000623448 346 ntBASIC3.13□□□□□ -1.91
ATG4DQ86TL0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.13□□□□□ -1.91
ATG4DQ86TL0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATG4DQ86TL0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATG4DQ86TL0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.66-201ENST00000362862 102 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RNU6-1209P-201ENST00000363655 107 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.323-201ENST00000365157 109 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RNU6-1113P-201ENST00000384348 107 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 SNORA26-201ENST00000391286 122 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 MIR1283-1-201ENST00000408494 87 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RNA5SP136-201ENST00000410906 107 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RNU6-57P-201ENST00000411348 103 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RPS3AP1-201ENST00000413190 320 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 CYCSP35-201ENST00000451978 304 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 AL441985.1-201ENST00000457727 251 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RNA5SP310-201ENST00000459084 116 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RPL23AP67-201ENST00000465341 474 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 ATP5EP1-201ENST00000510257 156 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 AC096725.1-201ENST00000514266 313 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 MIR2276-201ENST00000516886 89 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 SNORD19.2-201ENST00000516978 73 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 AC107934.2-201ENST00000518653 310 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.12□□□□□ -1.91
ATG4DQ86TL0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 RNU6-94P-201ENST00000607728 107 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 MIR7975-201ENST00000619350 68 ntBASIC3.12□□□□□ -1.91
ATG4DQ86TL0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATG4DQ86TL0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATG4DQ86TL0 MIR494-201ENST00000349529 81 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 RNU4-35P-201ENST00000362588 141 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.111-201ENST00000363248 100 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.220-201ENST00000364244 109 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 RNU6-117P-201ENST00000365415 107 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 RNU1-57P-201ENST00000384491 166 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 RNA5SP354-201ENST00000391247 136 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 AC007064.1-201ENST00000412238 351 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 AC245102.2-201ENST00000448956 180 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.11□□□□□ -1.91
ATG4DQ86TL0 COX6CP6-201ENST00000490840 228 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 RNU2-58P-201ENST00000516403 183 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.685-201ENST00000516532 108 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.11□□□□□ -1.91
ATG4DQ86TL0 AC096577.2-201ENST00000611455 153 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms