Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 AL139824.2-201ENST00000458731 1095 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 SCARNA18-201ENST00000459004 134 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 AC023442.1-201ENST00000531247 422 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 MIR4778-201ENST00000577635 80 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 RNA5SP201-201ENST00000410316 124 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 RNU6-977P-201ENST00000516411 103 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 RNA5SP94-201ENST00000516917 108 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 AC104073.3-201ENST00000610942 955 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 AC122133.1-201ENST00000613964 233 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 AC104260.1-201ENST00000616660 539 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 AL450472.1-202ENST00000637286 180 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 U6.108-201ENST00000637764 58 ntBASIC-0.32□□□□□ -2.46
CSMD3Q7Z407 SNORD14.1-201ENST00000365609 90 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 MIR548H2-201ENST00000408874 88 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 SNAP23P1-201ENST00000433229 246 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AP002004.2-201ENST00000531656 154 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AC100830.2-201ENST00000581636 240 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 MIR1302-7-201ENST00000408841 72 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 RNU6-613P-201ENST00000410412 108 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 CALM2P2-201ENST00000428512 440 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 RPL17P35-201ENST00000432217 549 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 RPL23AP30-201ENST00000432419 501 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AP000870.1-201ENST00000472927 406 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 SNORA59B-202ENST00000578183 701 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 MIR4263-201ENST00000584745 83 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AP000907.4-201ENST00000604143 237 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AC022893.3-201ENST00000607665 437 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 SNORA75B-201ENST00000384053 137 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 SNORD41-201ENST00000386967 70 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 MIR1298-201ENST00000408783 112 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 RPS3AP3-201ENST00000411933 242 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 MTCO1P20-201ENST00000425366 358 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AC103996.1-201ENST00000555468 102 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 AC174048.1-201ENST00000603389 144 ntBASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
CSMD3Q7Z407 RNA5SP192-201ENST00000364404 120 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 RNA5SP117-201ENST00000365294 118 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 AC007283.2-201ENST00000424739 197 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 AC114755.3-201ENST00000481111 251 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 AC079395.1-201ENST00000510981 262 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 RNA5SP180-201ENST00000516181 101 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 RNU7-43P-201ENST00000516554 64 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 ZNF204P-201ENST00000416749 2397 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 RNU6-481P-201ENST00000384194 107 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 U8.16-201ENST00000391279 133 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 RNU6-370P-201ENST00000411008 104 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 AC013470.1-201ENST00000453438 462 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 MIR4436A-201ENST00000585278 85 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 RNU6-440P-201ENST00000390882 105 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 ELOCP17-201ENST00000414751 326 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 AC004386.2-201ENST00000441858 148 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 MIR3115-201ENST00000577915 68 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 AC011921.3-201ENST00000605540 361 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.34□□□□□ -2.46
CSMD3Q7Z407 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 RNU6-777P-201ENST00000364265 104 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 SNORD83.1-201ENST00000411362 77 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 AC008134.1-201ENST00000420943 193 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 MTND1P32-201ENST00000433043 938 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 MTND4P15-201ENST00000437913 1033 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 RNU6-448P-201ENST00000517052 107 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 MIR4804-201ENST00000581683 73 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 AP000753.3-201ENST00000604083 169 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 RNU6-88P-201ENST00000606801 100 ntBASIC-0.35□□□□□ -2.46
CSMD3Q7Z407 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 USP9YP11-201ENST00000427537 717 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 AC016911.1-201ENST00000613297 452 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 SNORA33-201ENST00000363664 130 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 TIMM9P3-201ENST00000428659 274 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 AP001372.4-201ENST00000524889 472 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 AC006600.1-201ENST00000572529 153 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 AC023158.2-201ENST00000614876 543 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 AC131159.1-201ENST00000621854 213 ntBASIC-0.35□□□□□ -2.47
CSMD3Q7Z407 RNU6-511P-201ENST00000363496 107 ntBASIC-0.36□□□□□ -2.47
CSMD3Q7Z407 RNY1P7-201ENST00000384743 110 ntBASIC-0.36□□□□□ -2.47
CSMD3Q7Z407 MIR586-201ENST00000385035 97 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms