Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 AL031274.2-201ENST00000599419 203 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 AL033523.1-201ENST00000605153 153 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 AC011373.1-201ENST00000607270 237 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 AC046143.2-201ENST00000609789 160 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.05□□□□□ -2.08
SHFQ7M4L6 MIR8062-201ENST00000621515 85 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.05□□□□□ -2.08
SHFQ7M4L6 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.05□□□□□ -2.08
SHFQ7M4L6 MIR203B-201ENST00000636080 86 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.05□□□□□ -2.08
SHFQ7M4L6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHFQ7M4L6 AC009487.4-201ENST00000624969 3585 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHFQ7M4L6 SNORD115-3-201ENST00000363100 82 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 RNU6-574P-201ENST00000384265 107 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 RNU6-472P-201ENST00000384299 107 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 RNU6-160P-201ENST00000384591 107 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 RNU6-713P-201ENST00000384761 107 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 AC009963.1-201ENST00000417265 157 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 IPO7P1-201ENST00000442031 636 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 AL109933.2-201ENST00000452651 260 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 HSPE1P25-201ENST00000455484 251 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 AC104435.1-201ENST00000483483 166 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 HMGB3P17-201ENST00000504195 649 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 AC234781.5-201ENST00000508429 271 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 RNU6-155P-201ENST00000516347 100 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 AL161670.1-201ENST00000554348 137 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.04□□□□□ -2.08
SHFQ7M4L6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.04□□□□□ -2.08
SHFQ7M4L6 AL590240.4-201ENST00000616908 390 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 U6.115-201ENST00000636045 103 ntBASIC2.04□□□□□ -2.08
SHFQ7M4L6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SHFQ7M4L6 SNORD81.1-201ENST00000363064 77 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 Y_RNA.144-201ENST00000363521 113 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 SNORA80A-201ENST00000363922 136 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 SNORA3A-201ENST00000364113 130 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 Y_RNA.331-201ENST00000365267 102 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 Y_RNA.376-201ENST00000365638 108 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 SNORA11-201ENST00000408789 128 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.03□□□□□ -2.08
SHFQ7M4L6 AL390729.2-201ENST00000416137 156 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
SHFQ7M4L6 AC060773.1-201ENST00000421698 310 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 AC005042.3-201ENST00000453230 174 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 RNU1-131P-201ENST00000458943 161 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 AP001486.1-201ENST00000463339 476 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.03□□□□□ -2.08
SHFQ7M4L6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.03□□□□□ -2.08
SHFQ7M4L6 RNU6-570P-201ENST00000517051 105 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 EIF4BP1-201ENST00000554881 351 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 MIR4503-201ENST00000582187 83 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 SNORD113-5-201ENST00000607261 78 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 AC006001.4-201ENST00000622243 395 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.03□□□□□ -2.08
SHFQ7M4L6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
SHFQ7M4L6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
SHFQ7M4L6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHFQ7M4L6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.02□□□□□ -2.09
SHFQ7M4L6 ZNF658B-202ENST00000615961 3375 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 Y_RNA.84-201ENST00000363011 104 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 RNA5SP493-201ENST00000364115 91 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 SNORD115-30-201ENST00000364117 82 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 Y_RNA.243-201ENST00000364481 109 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 Y_RNA.396-201ENST00000383949 103 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 SNORA6-201ENST00000384033 151 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 RNU6-196P-201ENST00000384315 107 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 Y_RNA.541-201ENST00000384640 113 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 RNU6-21P-201ENST00000384710 107 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 MT-TW-201ENST00000387382 68 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.02□□□□□ -2.09
SHFQ7M4L6 RPL23AP36-201ENST00000413895 458 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 AC245102.2-201ENST00000448956 180 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 AC108938.1-201ENST00000451204 136 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 SEPT14P8-201ENST00000508026 178 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.02□□□□□ -2.09
SHFQ7M4L6 MIR3169-201ENST00000578032 83 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 SNORD53-201ENST00000579969 78 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 MIR3200-201ENST00000580767 85 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 7SK.10-201ENST00000621414 298 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 AC127459.3-201ENST00000624328 466 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 CTSLP2-204ENST00000629029 392 ntBASIC2.02□□□□□ -2.09
SHFQ7M4L6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.02□□□□□ -2.09
SHFQ7M4L6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHFQ7M4L6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
SHFQ7M4L6 AL159152.1-201ENST00000635019 2587 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 Y_RNA.461-201ENST00000384263 103 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 RNU6-463P-201ENST00000384340 107 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 Y_RNA.483-201ENST00000384380 101 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 MIR29C-201ENST00000385231 88 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 HMGN2P39-201ENST00000398005 273 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 AL355796.1-201ENST00000406706 323 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 RNU6-1203P-201ENST00000410703 110 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.01□□□□□ -2.09
SHFQ7M4L6 AC008134.1-201ENST00000420943 193 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 BX510359.4-201ENST00000423750 193 ntBASIC2.01□□□□□ -2.09
SHFQ7M4L6 AC018634.1-201ENST00000437554 401 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms