Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AP005660.1-201ENST00000522972 293 ntBASIC1.6□□□□□ -2.15
RFWD3Q6PCD5 AC093023.1-201ENST00000547375 507 ntBASIC1.6□□□□□ -2.15
RFWD3Q6PCD5 AC015720.1-201ENST00000565251 277 ntBASIC1.6□□□□□ -2.15
RFWD3Q6PCD5 C8orf59P2-201ENST00000603441 271 ntBASIC1.6□□□□□ -2.15
RFWD3Q6PCD5 CYP2C61P-201ENST00000604072 290 ntBASIC1.6□□□□□ -2.15
RFWD3Q6PCD5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.6□□□□□ -2.15
RFWD3Q6PCD5 MTND5P35-201ENST00000557537 1720 ntBASIC1.6□□□□□ -2.15
RFWD3Q6PCD5 AC073544.1-201ENST00000600110 1595 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 RNU6-727P-201ENST00000363592 107 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 Y_RNA.415-201ENST00000384012 112 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 SNORA69.1-201ENST00000390904 137 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 AC114482.1-201ENST00000418010 247 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 AC099799.1-201ENST00000439809 192 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 RNU6-498P-201ENST00000459468 107 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 CYCSP23-201ENST00000519781 313 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 AC144568.1-201ENST00000520139 137 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 AC125232.2-201ENST00000592457 143 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 MZT1P2-201ENST00000604387 248 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 AC087588.2-201ENST00000617667 426 ntBASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.59□□□□□ -2.15
RFWD3Q6PCD5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.59□□□□□ -2.16
RFWD3Q6PCD5 U3.8-201ENST00000363675 217 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 SNORD87-201ENST00000364849 89 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 RNU6-1145P-201ENST00000384246 107 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.509-201ENST00000384506 99 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 MIR329-1-201ENST00000385028 80 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 RNU6-1001P-201ENST00000411265 100 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 BTF3P4-201ENST00000418852 495 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AC016717.1-201ENST00000448918 286 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 U8.22-201ENST00000459141 133 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 RNU7-57P-201ENST00000459540 60 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AC105758.1-201ENST00000506038 399 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 RNU6-699P-201ENST00000517081 110 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AC022868.1-201ENST00000517767 391 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AC091144.1-201ENST00000519573 138 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AC005786.1-201ENST00000588553 154 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AL133255.1-201ENST00000606374 441 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AC104985.2-201ENST00000620598 500 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 AL159152.1-201ENST00000635019 2587 ntBASIC1.58□□□□□ -2.16
RFWD3Q6PCD5 RNU6-879P-201ENST00000364328 108 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.315-201ENST00000365117 102 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.431-201ENST00000384086 102 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.463-201ENST00000384271 102 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 MIR548B-201ENST00000385247 97 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 RNA5SP212-201ENST00000391223 107 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.592-201ENST00000410274 109 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 MRPS18CP6-201ENST00000423587 223 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 MTND4P28-201ENST00000426217 387 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 RN7SKP49-201ENST00000516675 260 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 AK6P2-201ENST00000549020 471 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 U1.36-201ENST00000620684 176 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 snoZ196.1-201ENST00000625269 89 ntBASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.57□□□□□ -2.16
RFWD3Q6PCD5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 RNU6-1115P-201ENST00000362490 106 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 RNA5SP361-201ENST00000362686 118 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 RNU4-13P-201ENST00000364019 141 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.314-201ENST00000365114 102 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.428-201ENST00000384078 102 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.579-201ENST00000390939 94 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.595-201ENST00000410403 105 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 RNA5SP501-201ENST00000410990 112 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 RNU6-57P-201ENST00000411348 103 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 AC008834.1-201ENST00000511612 175 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 AC083806.3-201ENST00000614016 455 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 AC022513.1-201ENST00000624512 117 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 AC245060.5-201ENST00000610778 3293 ntBASIC1.56□□□□□ -2.16
RFWD3Q6PCD5 RNU6-318P-201ENST00000384283 103 ntBASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 SNORA48.1-201ENST00000390879 135 ntBASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 Y_RNA.605-201ENST00000410577 105 ntBASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 AC060773.1-201ENST00000421698 310 ntBASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 RNU6-221P-201ENST00000459541 99 ntBASIC1.55□□□□□ -2.16
RFWD3Q6PCD5 AC027575.1-201ENST00000481064 460 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms