Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC093831.2-201ENST00000624393 3427 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 AC096644.4-201ENST00000563417 2912 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-151P-201ENST00000364158 107 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 SNORA51.4-201ENST00000364993 124 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-81P-201ENST00000365608 104 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-1117P-201ENST00000384525 104 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-417P-201ENST00000384712 107 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 MIR1294-201ENST00000408503 142 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 RNU2-52P-201ENST00000410680 190 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 HSPE1P21-201ENST00000438283 308 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 SNORD109B-201ENST00000458961 67 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 SNORD109A-201ENST00000459128 67 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 RNU7-14P-201ENST00000459331 62 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 HMGN2P9-201ENST00000476875 229 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 AC092185.1-201ENST00000491371 97 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-1007P-201ENST00000516586 107 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 AC025754.2-201ENST00000606491 432 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 AC007318.2-201ENST00000620999 243 ntBASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF40BQ6NWY9 AC091564.4-201ENST00000533934 2194 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 MAPK10-322ENST00000641485 4530 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 Y_RNA.24-201ENST00000362508 103 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 Y_RNA.215-201ENST00000364204 112 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 MIR626-201ENST00000385032 94 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-578P-201ENST00000390980 103 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-239P-201ENST00000390990 99 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 RNA5SP508-201ENST00000411327 119 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 AL162725.1-201ENST00000435405 301 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 RNU7-141P-201ENST00000459304 62 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 TRBV12-1-201ENST00000479785 344 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 AC107027.2-201ENST00000512197 115 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 MIR449C-201ENST00000516047 92 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 SNORD116-25-201ENST00000516517 92 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 RNA5SP380-201ENST00000517190 98 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 Y_RNA.778-201ENST00000620203 90 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 U6.98-201ENST00000637157 84 ntBASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRPF40BQ6NWY9 MIR367-201ENST00000362299 68 ntBASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 Y_RNA.310-201ENST00000365063 113 ntBASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 MIR300-201ENST00000401138 83 ntBASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 MIR1185-2-201ENST00000408687 86 ntBASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 MRPS36P2-201ENST00000512569 299 ntBASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF40BQ6NWY9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 snoU2_19.4-201ENST00000364329 80 ntBASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-969P-201ENST00000383900 105 ntBASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-131P-201ENST00000391144 107 ntBASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 MIR1283-1-201ENST00000408494 87 ntBASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 AC107016.2-201ENST00000547968 190 ntBASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 MIR4431-201ENST00000579990 94 ntBASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 AC099778.2-201ENST00000610904 211 ntBASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PRPF40BQ6NWY9 Y_RNA.361-201ENST00000365515 120 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 Y_RNA.568-201ENST00000384742 113 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 MIR196B-201ENST00000384852 84 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 RNU7-57P-201ENST00000459540 60 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 YWHAEP4-201ENST00000505390 198 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 AC107294.3-201ENST00000609211 526 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF40BQ6NWY9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 SNORA9.2-201ENST00000365361 133 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 CD24P4-201ENST00000382840 243 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 MIR518C-201ENST00000384822 101 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 MIR526A2-201ENST00000390198 65 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 MIR873-201ENST00000401120 77 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 RNA5SP274-201ENST00000410484 108 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 AC245047.8-201ENST00000456455 284 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 RN7SL633P-201ENST00000488974 297 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-426P-201ENST00000516464 97 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-62P-201ENST00000516526 102 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 MIR4724-201ENST00000579485 89 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 AC090616.3-201ENST00000582184 217 ntBASIC3.59□□□□□ -1.83
PRPF40BQ6NWY9 AC068647.2-201ENST00000637380 353 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms