Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AL390237.1-201ENST00000404226 1415 ntBASIC0.13□□□□□ -2.39
LPCAT4Q643R3 AC073544.1-201ENST00000600110 1595 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.12□□□□□ -2.39
LPCAT4Q643R3 RNU6-137P-201ENST00000363680 108 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 RNY4P34-201ENST00000364779 95 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 RNU6-606P-201ENST00000384721 111 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 MIR1185-1-201ENST00000408598 86 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.12□□□□□ -2.39
LPCAT4Q643R3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.12□□□□□ -2.39
LPCAT4Q643R3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 AL137161.1-201ENST00000532231 390 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.12□□□□□ -2.39
LPCAT4Q643R3 HIF1AP1-201ENST00000553642 175 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.12□□□□□ -2.39
LPCAT4Q643R3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.12□□□□□ -2.39
LPCAT4Q643R3 U2.17-201ENST00000611454 95 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 AC006435.5-201ENST00000624486 112 ntBASIC0.12□□□□□ -2.39
LPCAT4Q643R3 ZNF204P-201ENST00000416749 2397 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 Y_RNA.295-201ENST00000364918 102 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 MIR562-201ENST00000384894 95 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 MIR32-201ENST00000384965 70 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 MIR513B-201ENST00000385136 84 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
LPCAT4Q643R3 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.11□□□□□ -2.39
LPCAT4Q643R3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.11□□□□□ -2.39
LPCAT4Q643R3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.11□□□□□ -2.39
LPCAT4Q643R3 MRPS10P1-201ENST00000448483 130 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 UBE2V1P12-201ENST00000503954 474 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
LPCAT4Q643R3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.11□□□□□ -2.39
LPCAT4Q643R3 MIR548AB-201ENST00000584917 84 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 MIR4438-201ENST00000585271 93 ntBASIC0.11□□□□□ -2.39
LPCAT4Q643R3 SNORA25.3-201ENST00000363205 127 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 SNORD87-201ENST00000364849 89 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 SNORD105-201ENST00000386910 85 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 RNA5SP482-201ENST00000391269 118 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 SNORD111-201ENST00000408139 94 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 RNU6-994P-201ENST00000410507 111 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 RPL31P35-201ENST00000431058 377 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 MTCO2P18-201ENST00000457151 658 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 HMGN2P26-201ENST00000463169 339 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 AC091133.4-201ENST00000511142 308 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.1□□□□□ -2.39
LPCAT4Q643R3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.1□□□□□ -2.39
LPCAT4Q643R3 AC027288.2-201ENST00000553028 243 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 AL022161.1-201ENST00000604390 213 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 Z84480.1-201ENST00000605131 311 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 TUSC7.1-201ENST00000610969 165 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.1□□□□□ -2.39
LPCAT4Q643R3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.1□□□□□ -2.39
LPCAT4Q643R3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
LPCAT4Q643R3 MIR103A1-201ENST00000362165 78 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 Y_RNA.123-201ENST00000363338 102 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 SNORD115-8-201ENST00000363856 82 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 SNORD115-38-201ENST00000365037 82 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 MIR1827-201ENST00000408549 66 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 U8.21-201ENST00000459536 136 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.09□□□□□ -2.4
LPCAT4Q643R3 AC105313.1-201ENST00000509121 353 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 RNA5SP54-201ENST00000516951 92 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 AP001372.4-201ENST00000524889 472 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.09□□□□□ -2.4
LPCAT4Q643R3 AC036111.3-201ENST00000526389 112 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 AC064836.2-201ENST00000609491 462 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.09□□□□□ -2.4
LPCAT4Q643R3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 RNU6-833P-201ENST00000363486 107 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 Y_RNA.280-201ENST00000364765 112 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AC010469.2-201ENST00000496412 480 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AC005178.1-201ENST00000508392 440 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 RN7SKP164-201ENST00000516138 266 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 RNU2-56P-201ENST00000516826 190 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 RNU6-341P-201ENST00000516973 96 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 RNU6-58P-201ENST00000517143 103 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 RNU6-1116P-201ENST00000517269 99 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AF235103.2-201ENST00000525753 346 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AC023157.2-201ENST00000540596 141 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.08□□□□□ -2.4
LPCAT4Q643R3 ELOCP32-201ENST00000548625 324 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AC010620.1-201ENST00000601088 1102 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AC100812.1-201ENST00000607622 580 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.08□□□□□ -2.4
LPCAT4Q643R3 AL008636.1-201ENST00000625038 1018 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 OR5AK4P-201ENST00000635912 903 ntBASIC0.08□□□□□ -2.4
LPCAT4Q643R3 SNORA1B-201ENST00000362535 133 ntBASIC0.07□□□□□ -2.4
LPCAT4Q643R3 RNU6-1317P-201ENST00000364582 104 ntBASIC0.07□□□□□ -2.4
LPCAT4Q643R3 RNU6-282P-201ENST00000365357 103 ntBASIC0.07□□□□□ -2.4
LPCAT4Q643R3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.07□□□□□ -2.4
LPCAT4Q643R3 AL049545.1-201ENST00000401856 572 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms