Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 MIR1185-2-201ENST00000408687 86 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 MIR1302-7-201ENST00000408841 72 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 RNU6-1245P-201ENST00000411130 106 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 USP9YP21-201ENST00000420603 432 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 RPS29P27-201ENST00000463711 170 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 MIR4676-201ENST00000583078 72 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 AL158042.1-201ENST00000605338 460 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 MIR7107-201ENST00000611489 80 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 AL442067.1-201ENST00000613261 223 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 AC103706.2-201ENST00000638080 240 ntBASIC-1.57□□□□□ -2.66
CCDC18Q5T9S5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 RNA5SP48-201ENST00000363969 126 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 SNORD115-48-201ENST00000364764 76 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 SNRPGP7-201ENST00000469016 106 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 RNU6-677P-201ENST00000516914 101 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 AP001372.4-201ENST00000524889 472 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 MIR4306-201ENST00000583390 91 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 MIR4499-201ENST00000584834 69 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 AC063944.3-201ENST00000609969 533 ntBASIC-1.58□□□□□ -2.66
CCDC18Q5T9S5 RNU6-353P-201ENST00000364266 108 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 AC092809.3-201ENST00000415453 231 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 AC078809.1-201ENST00000427601 140 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 AC007215.1-201ENST00000464893 276 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 MIR4771-2-201ENST00000577758 74 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 MIR4771-1-201ENST00000582617 74 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 AC012433.1-201ENST00000588916 398 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 AC104260.1-201ENST00000616660 539 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 uc_338.19-201ENST00000616808 99 ntBASIC-1.59□□□□□ -2.66
CCDC18Q5T9S5 MTND3P20-201ENST00000407663 186 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 AC079395.1-201ENST00000510981 262 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 RNU7-28P-201ENST00000516759 62 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 AC174048.1-201ENST00000603389 144 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 AC010999.1-201ENST00000611856 324 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 AC026585.1-201ENST00000619582 524 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 AL136221.1-201ENST00000621449 509 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 MIR6828-201ENST00000636181 60 ntBASIC-1.6□□□□□ -2.67
CCDC18Q5T9S5 SNORD32A-201ENST00000364805 84 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 MIR1298-201ENST00000408783 112 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 AC010975.2-201ENST00000427781 588 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 MTCO1P5-201ENST00000433573 344 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 RNU7-99P-201ENST00000516271 62 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 RNU6-158P-201ENST00000517104 100 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 CR383656.4-201ENST00000546909 122 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 AC107905.1-201ENST00000616204 426 ntBASIC-1.61□□□□□ -2.67
CCDC18Q5T9S5 MIR655-201ENST00000362159 97 ntBASIC-1.62□□□□□ -2.67
CCDC18Q5T9S5 SNORD115-2-201ENST00000362842 82 ntBASIC-1.62□□□□□ -2.67
CCDC18Q5T9S5 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.62□□□□□ -2.67
CCDC18Q5T9S5 MTND2P20-201ENST00000440805 661 ntBASIC-1.62□□□□□ -2.67
CCDC18Q5T9S5 AC119751.4-201ENST00000507498 357 ntBASIC-1.62□□□□□ -2.67
CCDC18Q5T9S5 ZNF971P-201ENST00000562068 1249 ntBASIC-1.62□□□□□ -2.67
CCDC18Q5T9S5 MIR1264-201ENST00000616374 69 ntBASIC-1.62□□□□□ -2.67
CCDC18Q5T9S5 SNORD38B-202ENST00000625943 69 ntBASIC-1.62□□□□□ -2.67
CCDC18Q5T9S5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 AC009994.1-201ENST00000606889 253 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 MIR6514-201ENST00000622549 70 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 RNU6-580P-201ENST00000365159 107 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 RNU6-744P-201ENST00000365557 107 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 MIR2115-201ENST00000516657 100 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 MIR548AD-201ENST00000584780 82 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 Z99289.3-201ENST00000605586 594 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 AL139286.2-201ENST00000606838 396 ntBASIC-1.63□□□□□ -2.67
CCDC18Q5T9S5 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 RNU6-811P-201ENST00000384069 107 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 RNU6-549P-201ENST00000384433 107 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 MIR891A-201ENST00000401237 79 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 AC015818.7-201ENST00000428754 109 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 AC087499.7-201ENST00000441958 109 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 RNU6-583P-201ENST00000516012 92 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 SNORA74.3-201ENST00000517108 154 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 RNU7-128P-201ENST00000517247 62 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 AC023632.1-201ENST00000518463 375 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 MIR3152-201ENST00000579801 74 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 AC020891.4-201ENST00000605745 93 ntBASIC-1.64□□□□□ -2.67
CCDC18Q5T9S5 RNU6-384P-201ENST00000364900 104 ntBASIC-1.65□□□□□ -2.67
CCDC18Q5T9S5 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.65□□□□□ -2.67
CCDC18Q5T9S5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.65□□□□□ -2.67
CCDC18Q5T9S5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.65□□□□□ -2.67
CCDC18Q5T9S5 AL500527.2-201ENST00000454105 95 ntBASIC-1.65□□□□□ -2.67
CCDC18Q5T9S5 RNU6-706P-201ENST00000517229 104 ntBASIC-1.65□□□□□ -2.67
CCDC18Q5T9S5 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.66□□□□□ -2.68
CCDC18Q5T9S5 RNU6-116P-201ENST00000384042 109 ntBASIC-1.66□□□□□ -2.68
CCDC18Q5T9S5 AC013470.1-201ENST00000453438 462 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms