Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AC069114.2-201ENST00000604699 304 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 AC007485.1-201ENST00000616755 206 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 U6.92-201ENST00000636464 89 ntBASIC1.89□□□□□ -2.11
LRIF1Q5T3J3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 AC005592.1-201ENST00000566527 1640 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.31-201ENST00000362574 102 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.80-201ENST00000362996 102 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.394-201ENST00000383942 103 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 MIR548P-201ENST00000408336 84 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 AC010469.2-201ENST00000496412 480 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 AC010598.1-201ENST00000510378 103 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.701-201ENST00000516812 110 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 AC024995.1-201ENST00000523014 93 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 AL121655.1-201ENST00000605811 308 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 AC240442.1-201ENST00000616055 283 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 SCARNA15.3-201ENST00000626315 122 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 SCARNA4.1-201ENST00000628597 123 ntBASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LRIF1Q5T3J3 ZNF72P-201ENST00000425869 1908 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 SNORD14.1-201ENST00000365609 90 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 AC117470.1-201ENST00000381974 330 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 RNU6-926P-201ENST00000384075 107 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 RNU6-708P-201ENST00000384217 107 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 AC009310.1-201ENST00000414414 451 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 AC069257.2-201ENST00000441819 155 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 SNORD65B-201ENST00000459126 73 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.713-201ENST00000517013 96 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 AL137100.2-201ENST00000555786 315 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 MIR5094-201ENST00000578766 85 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 AC010900.2-201ENST00000604508 210 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LRIF1Q5T3J3 AC245060.5-201ENST00000610778 3293 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.138-201ENST00000363462 102 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 RNU6-961P-201ENST00000363893 105 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.230-201ENST00000364348 109 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 RNU4-50P-201ENST00000364361 141 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.510-201ENST00000384511 114 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 RNU6-417P-201ENST00000384712 107 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 AL023284.1-201ENST00000403956 276 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 RNA5SP100-201ENST00000410903 110 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 RNA5SP59-201ENST00000410922 110 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 AL354751.2-201ENST00000415471 210 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 AC008413.1-201ENST00000511864 177 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.711-201ENST00000516993 102 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 AP002001.1-203ENST00000534002 267 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.772-201ENST00000606692 102 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 AL627230.6-201ENST00000611129 280 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
LRIF1Q5T3J3 SNORD114-7-201ENST00000362520 77 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 XGY1-201ENST00000381172 446 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.424-201ENST00000384063 103 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.485-201ENST00000384395 102 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 MIR634-201ENST00000385208 97 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 RNU6-308P-201ENST00000390957 107 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 AC040926.1-201ENST00000530195 238 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 AC020661.2-201ENST00000560114 134 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 AL390123.1-201ENST00000603216 237 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 AC005828.6-201ENST00000606610 232 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 AC091812.1-201ENST00000432235 1948 ntBASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
LRIF1Q5T3J3 RNU6-626P-201ENST00000363354 107 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 RNU6-112P-201ENST00000363599 104 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 RNU6-271P-201ENST00000363858 105 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 RNU6-454P-201ENST00000364292 107 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 SNORA63.7-201ENST00000365579 123 ntBASIC1.84□□□□□ -2.11
LRIF1Q5T3J3 Y_RNA.458-201ENST00000384240 102 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms