Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 SNORA63-201ENST00000363450 132 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 Y_RNA.158-201ENST00000363651 101 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 Y_RNA.485-201ENST00000384395 102 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 MIR634-201ENST00000385208 97 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 SNORA67.6-201ENST00000391093 99 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AL033519.2-201ENST00000403958 392 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 RNA5SP504-201ENST00000410676 117 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 MTCO3P19-201ENST00000415864 321 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AL445305.1-201ENST00000432577 575 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AL160004.2-201ENST00000432935 350 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AC015922.2-201ENST00000435593 184 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.46□□□□□ -2.18
CKAP4Q07065 AL137159.1-201ENST00000452808 512 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AC091179.3-201ENST00000474761 144 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.46□□□□□ -2.18
CKAP4Q07065 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 RNU6-965P-201ENST00000516721 96 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 RNU6-667P-201ENST00000517186 102 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AC022868.1-201ENST00000517767 391 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.46□□□□□ -2.18
CKAP4Q07065 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 MIR5006-201ENST00000583027 110 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AC010999.1-201ENST00000611856 324 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AC008873.1-201ENST00000625051 138 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.46□□□□□ -2.18
CKAP4Q07065 AC099654.10-201ENST00000640395 161 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AC091812.1-201ENST00000432235 1948 ntBASIC1.46□□□□□ -2.18
CKAP4Q07065 AL356292.1-201ENST00000283110 373 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 RNA5SP361-201ENST00000362686 118 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 Y_RNA.179-201ENST00000363844 90 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 SNORD31B-201ENST00000364977 69 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 Y_RNA.332-201ENST00000365271 113 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 RNU6-708P-201ENST00000384217 107 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 RNU6-793P-201ENST00000384233 104 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.45□□□□□ -2.18
CKAP4Q07065 AL357134.1-201ENST00000445848 426 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 HMGN2P18-201ENST00000450680 270 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 AC016925.1-201ENST00000458303 298 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 AC093259.1-201ENST00000509755 300 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 Y_RNA.683-201ENST00000516508 93 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 RNU5F-4P-201ENST00000516581 114 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 RNU6-1012P-201ENST00000516606 109 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 CYCSP23-201ENST00000519781 313 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.45□□□□□ -2.18
CKAP4Q07065 MIR3198-2-201ENST00000577868 80 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 AC104695.3-201ENST00000604052 296 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 MZT1P2-201ENST00000604387 248 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 AC016925.2-201ENST00000605108 242 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 AL353621.2-201ENST00000605340 133 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 SNORD11B-201ENST00000607707 90 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.45□□□□□ -2.18
CKAP4Q07065 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.45□□□□□ -2.18
CKAP4Q07065 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.45□□□□□ -2.18
CKAP4Q07065 AC007742.2-201ENST00000618226 398 ntBASIC1.45□□□□□ -2.18
CKAP4Q07065 ZNF72P-201ENST00000425869 1908 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 MTND5P35-201ENST00000557537 1720 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 U8.2-201ENST00000363156 134 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 RNU6-879P-201ENST00000364328 108 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 RNU6-203P-201ENST00000384038 104 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 Y_RNA.422-201ENST00000384054 114 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 MIR586-201ENST00000385035 97 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 MIR628-201ENST00000385229 95 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 MIR300-201ENST00000401138 83 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AL357139.1-201ENST00000407792 426 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 SRIP3-201ENST00000413200 219 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.44□□□□□ -2.18
CKAP4Q07065 AC010095.1-201ENST00000443543 144 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.44□□□□□ -2.18
CKAP4Q07065 NDUFB4P10-201ENST00000452541 359 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 RNU7-14P-201ENST00000459331 62 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AC010469.2-201ENST00000496412 480 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.44□□□□□ -2.18
CKAP4Q07065 RNU6-1137P-201ENST00000517073 99 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AC022616.4-201ENST00000522985 181 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AK6P2-201ENST00000549020 471 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 RRN3P3-201ENST00000549207 578 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.44□□□□□ -2.18
CKAP4Q07065 MIR4680-201ENST00000580906 66 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AL357075.2-201ENST00000614906 189 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AC010205.1-201ENST00000616668 449 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 MIR7843-201ENST00000622274 79 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 AC068205.3-201ENST00000636385 468 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.44□□□□□ -2.18
CKAP4Q07065 MIR340-201ENST00000362125 95 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 RNU6-545P-201ENST00000362681 104 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 Y_RNA.526-201ENST00000384572 110 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 RNU6-823P-201ENST00000391042 103 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 MRPL35P1-201ENST00000404272 572 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 AL590004.1-201ENST00000405321 300 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 MIR1283-1-201ENST00000408494 87 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 MIR1283-2-201ENST00000408621 87 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 Y_RNA.595-201ENST00000410403 105 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.43□□□□□ -2.18
CKAP4Q07065 SDAD1P3-201ENST00000427380 333 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 PRELID3BP1-201ENST00000457142 540 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 HMGN2P9-201ENST00000476875 229 ntBASIC1.43□□□□□ -2.18
CKAP4Q07065 RPL26P26-201ENST00000480251 434 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms