Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 MIR8063-201ENST00000621930 81 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC019226.2-201ENST00000625973 424 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL7A1Q02388 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL7A1Q02388 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNA5SP93-201ENST00000362525 114 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU6-562P-201ENST00000362731 107 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU6-353P-201ENST00000364266 108 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU6-843P-201ENST00000384454 104 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 MTND3P20-201ENST00000407663 186 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 AL353777.1-201ENST00000425552 326 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AL356583.2-201ENST00000426536 280 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 SEPT7P4-201ENST00000437076 306 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC093019.1-201ENST00000443135 252 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 ELOCP24-201ENST00000456370 334 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC006026.2-201ENST00000457376 180 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU7-57P-201ENST00000459540 60 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AL049829.1-201ENST00000465411 156 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 MTND3P25-201ENST00000509243 135 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC117522.1-201ENST00000509821 380 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU2-53P-201ENST00000516257 147 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU6-64P-201ENST00000517119 105 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC069113.3-201ENST00000521019 150 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 MIR3165-201ENST00000579874 75 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC087683.1-201ENST00000591187 441 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RN7SL660P-201ENST00000614852 299 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC063943.3-201ENST00000615562 356 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC078880.5-201ENST00000617845 421 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 MIR6738-201ENST00000619620 64 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC137590.2-201ENST00000619709 240 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 MTND5P16-201ENST00000460269 1703 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNU6-97P-201ENST00000363387 104 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNA5SP482-201ENST00000391269 118 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 PIGPP3-201ENST00000425307 415 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 MTCO3P43-201ENST00000440974 771 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 BTBD7P2-201ENST00000441962 620 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNU7-182P-201ENST00000459009 62 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC093303.1-201ENST00000514549 295 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC115990.1-201ENST00000526957 301 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 DEFB130C-202ENST00000530001 230 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 ZNF971P-201ENST00000562068 1249 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC091178.2-201ENST00000584401 117 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 MIR548AD-201ENST00000584780 82 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC012433.1-201ENST00000588916 398 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AP001836.1-201ENST00000604675 523 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC072039.2-201ENST00000608883 439 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC092574.1-201ENST00000609771 420 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 uc_338.36-201ENST00000622331 158 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 SNORA43.4-201ENST00000629559 138 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC008993.2-201ENST00000631744 806 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 MTND4P9-201ENST00000507819 1346 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 SNORD68-201ENST00000363214 84 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 SNORD38C-201ENST00000384381 69 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNU6-658P-201ENST00000384606 106 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 MIR610-201ENST00000385139 96 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 MIR1298-201ENST00000408783 112 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 MTCO2P1-201ENST00000424648 477 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.07□□□□□ -2.42
COL7A1Q02388 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 MTATP6P14-201ENST00000455189 673 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNU7-62P-201ENST00000458856 62 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 snoU13.27-201ENST00000459278 104 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 SNORA31.10-201ENST00000516482 106 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNU6-334P-201ENST00000517072 102 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 RNU6-58P-201ENST00000517143 103 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC104576.1-201ENST00000524225 88 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AC123904.2-201ENST00000548059 300 ntBASIC-0.07□□□□□ -2.42
COL7A1Q02388 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms