Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MIR660-201ENST00000385235 97 ntBASIC1.03□□□□□ -2.24
CBX1P83916 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.03□□□□□ -2.24
CBX1P83916 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
CBX1P83916 MRPS10P1-201ENST00000448483 130 ntBASIC1.03□□□□□ -2.24
CBX1P83916 HSPE1P13-201ENST00000451143 297 ntBASIC1.03□□□□□ -2.24
CBX1P83916 SNORD65B-201ENST00000459126 73 ntBASIC1.03□□□□□ -2.24
CBX1P83916 AP000870.1-201ENST00000472927 406 ntBASIC1.03□□□□□ -2.24
CBX1P83916 AC093852.1-201ENST00000503587 266 ntBASIC1.03□□□□□ -2.24
CBX1P83916 AC108729.3-201ENST00000513484 108 ntBASIC1.03□□□□□ -2.24
CBX1P83916 RNU6-314P-201ENST00000516574 104 ntBASIC1.03□□□□□ -2.24
CBX1P83916 RNU6-922P-201ENST00000516753 99 ntBASIC1.03□□□□□ -2.24
CBX1P83916 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.03□□□□□ -2.24
CBX1P83916 MIR4273-201ENST00000582824 84 ntBASIC1.03□□□□□ -2.24
CBX1P83916 AP000942.3-201ENST00000603702 160 ntBASIC1.03□□□□□ -2.24
CBX1P83916 AC018630.2-201ENST00000534866 2403 ntBASIC1.03□□□□□ -2.25
CBX1P83916 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
CBX1P83916 RNU6-306P-201ENST00000384617 107 ntBASIC1.02□□□□□ -2.25
CBX1P83916 MIR10B-201ENST00000385011 110 ntBASIC1.02□□□□□ -2.25
CBX1P83916 MIR146A-201ENST00000385201 99 ntBASIC1.02□□□□□ -2.25
CBX1P83916 SNORA17.3-201ENST00000391159 129 ntBASIC1.02□□□□□ -2.25
CBX1P83916 RAB28P5-201ENST00000427490 651 ntBASIC1.02□□□□□ -2.25
CBX1P83916 STAG3L5P-204ENST00000443759 179 ntBASIC1.02□□□□□ -2.25
CBX1P83916 RPS27P22-201ENST00000478056 241 ntBASIC1.02□□□□□ -2.25
CBX1P83916 RPS23P4-201ENST00000487908 423 ntBASIC1.02□□□□□ -2.25
CBX1P83916 RNU6-506P-201ENST00000516553 94 ntBASIC1.02□□□□□ -2.25
CBX1P83916 SNORA70.22-201ENST00000517160 124 ntBASIC1.02□□□□□ -2.25
CBX1P83916 AC027419.1-201ENST00000522976 328 ntBASIC1.02□□□□□ -2.25
CBX1P83916 AL590705.4-201ENST00000532209 134 ntBASIC1.02□□□□□ -2.25
CBX1P83916 AC023157.2-201ENST00000540596 141 ntBASIC1.02□□□□□ -2.25
CBX1P83916 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.02□□□□□ -2.25
CBX1P83916 SNORA28-201ENST00000606769 126 ntBASIC1.02□□□□□ -2.25
CBX1P83916 AC010999.1-201ENST00000611856 324 ntBASIC1.02□□□□□ -2.25
CBX1P83916 AC006435.5-201ENST00000624486 112 ntBASIC1.02□□□□□ -2.25
CBX1P83916 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CBX1P83916 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CBX1P83916 Y_RNA.533-201ENST00000384596 114 ntBASIC1.01□□□□□ -2.25
CBX1P83916 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.01□□□□□ -2.25
CBX1P83916 AC010469.2-201ENST00000496412 480 ntBASIC1.01□□□□□ -2.25
CBX1P83916 RNU6-107P-201ENST00000516643 102 ntBASIC1.01□□□□□ -2.25
CBX1P83916 AC091144.1-201ENST00000519573 138 ntBASIC1.01□□□□□ -2.25
CBX1P83916 AC024909.2-201ENST00000553035 286 ntBASIC1.01□□□□□ -2.25
CBX1P83916 AC245505.1-201ENST00000556398 224 ntBASIC1.01□□□□□ -2.25
CBX1P83916 AC103591.3-201ENST00000608684 209 ntBASIC1.01□□□□□ -2.25
CBX1P83916 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.01□□□□□ -2.25
CBX1P83916 AC024614.3-201ENST00000637860 256 ntBASIC1.01□□□□□ -2.25
CBX1P83916 RNU6-1090P-201ENST00000364065 94 ntBASIC1□□□□□ -2.25
CBX1P83916 Y_RNA.405-201ENST00000383979 100 ntBASIC1□□□□□ -2.25
CBX1P83916 Y_RNA.451-201ENST00000384200 100 ntBASIC1□□□□□ -2.25
CBX1P83916 Y_RNA.524-201ENST00000384564 100 ntBASIC1□□□□□ -2.25
CBX1P83916 Y_RNA.561-201ENST00000384694 100 ntBASIC1□□□□□ -2.25
CBX1P83916 RNU6-373P-201ENST00000411247 98 ntBASIC1□□□□□ -2.25
CBX1P83916 USMG5P1-201ENST00000425964 177 ntBASIC1□□□□□ -2.25
CBX1P83916 MTND3P21-201ENST00000433774 331 ntBASIC1□□□□□ -2.25
CBX1P83916 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1□□□□□ -2.25
CBX1P83916 AC010598.1-201ENST00000510378 103 ntBASIC1□□□□□ -2.25
CBX1P83916 SNORA31.2-201ENST00000516019 134 ntBASIC1□□□□□ -2.25
CBX1P83916 SNORA31.4-201ENST00000516049 129 ntBASIC1□□□□□ -2.25
CBX1P83916 Y_RNA.683-201ENST00000516508 93 ntBASIC1□□□□□ -2.25
CBX1P83916 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1□□□□□ -2.25
CBX1P83916 AC109635.3-201ENST00000529536 185 ntBASIC1□□□□□ -2.25
CBX1P83916 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1□□□□□ -2.25
CBX1P83916 MIR4778-201ENST00000577635 80 ntBASIC1□□□□□ -2.25
CBX1P83916 MIR3942-201ENST00000585264 109 ntBASIC1□□□□□ -2.25
CBX1P83916 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
CBX1P83916 GHRLOS.1-201ENST00000610995 70 ntBASIC1□□□□□ -2.25
CBX1P83916 AL133216.2-202ENST00000634512 349 ntBASIC1□□□□□ -2.25
CBX1P83916 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
CBX1P83916 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CBX1P83916 ZNF299P-201ENST00000406845 1804 ntBASIC0.99□□□□□ -2.25
CBX1P83916 RNU6-199P-201ENST00000362954 107 ntBASIC0.99□□□□□ -2.25
CBX1P83916 Y_RNA.338-201ENST00000365320 114 ntBASIC0.99□□□□□ -2.25
CBX1P83916 RNU6-596P-201ENST00000365395 98 ntBASIC0.99□□□□□ -2.25
CBX1P83916 RNU11-5P-201ENST00000391216 129 ntBASIC0.99□□□□□ -2.25
CBX1P83916 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
CBX1P83916 AC105758.1-201ENST00000506038 399 ntBASIC0.99□□□□□ -2.25
CBX1P83916 MIR6079-201ENST00000635807 62 ntBASIC0.99□□□□□ -2.25
CBX1P83916 Y_RNA.194-201ENST00000363985 102 ntBASIC0.98□□□□□ -2.25
CBX1P83916 Y_RNA.490-201ENST00000384413 102 ntBASIC0.98□□□□□ -2.25
CBX1P83916 Y_RNA.517-201ENST00000384551 106 ntBASIC0.98□□□□□ -2.25
CBX1P83916 MTCO3P19-201ENST00000415864 321 ntBASIC0.98□□□□□ -2.25
CBX1P83916 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.98□□□□□ -2.25
CBX1P83916 AC092473.1-201ENST00000441098 221 ntBASIC0.98□□□□□ -2.25
CBX1P83916 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.98□□□□□ -2.25
CBX1P83916 RNU6-1114P-201ENST00000516022 107 ntBASIC0.98□□□□□ -2.25
CBX1P83916 RNU6-273P-201ENST00000516937 96 ntBASIC0.98□□□□□ -2.25
CBX1P83916 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.98□□□□□ -2.25
CBX1P83916 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.98□□□□□ -2.25
CBX1P83916 AC013244.2-201ENST00000603396 103 ntBASIC0.98□□□□□ -2.25
CBX1P83916 AF250324.2-201ENST00000608299 610 ntBASIC0.98□□□□□ -2.25
CBX1P83916 AC012676.2-201ENST00000619258 186 ntBASIC0.98□□□□□ -2.25
CBX1P83916 AC090617.10-201ENST00000624308 134 ntBASIC0.98□□□□□ -2.25
CBX1P83916 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
CBX1P83916 RNU6-595P-201ENST00000363944 107 ntBASIC0.97□□□□□ -2.25
CBX1P83916 Y_RNA.265-201ENST00000364677 108 ntBASIC0.97□□□□□ -2.25
CBX1P83916 Y_RNA.402-201ENST00000383972 102 ntBASIC0.97□□□□□ -2.25
CBX1P83916 MIR653-201ENST00000385279 96 ntBASIC0.97□□□□□ -2.25
CBX1P83916 RNU6-910P-201ENST00000390844 107 ntBASIC0.97□□□□□ -2.25
CBX1P83916 Y_RNA.595-201ENST00000410403 105 ntBASIC0.97□□□□□ -2.25
CBX1P83916 AP1B1P2-201ENST00000416196 106 ntBASIC0.97□□□□□ -2.25
CBX1P83916 USP9YP16-201ENST00000430287 407 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms