Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNU6-735P-201ENST00000410612 107 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 RPL17P35-201ENST00000432217 549 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.74□□□□□ -2.53
UBA52P62987 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 AC009237.7-201ENST00000447357 229 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 SUMO1P2-201ENST00000452524 304 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 RNU6-377P-201ENST00000515965 102 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.74□□□□□ -2.53
UBA52P62987 AC012409.4-201ENST00000612923 249 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 RNU6-428P-201ENST00000362942 107 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 RNU6-284P-201ENST00000411105 106 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 RNU6-607P-201ENST00000411283 108 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 MTND1P4-201ENST00000435196 415 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AL158053.1-201ENST00000441503 453 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 MTND1P17-201ENST00000448961 204 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AC091021.1-201ENST00000468051 388 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.75□□□□□ -2.53
UBA52P62987 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.75□□□□□ -2.53
UBA52P62987 MTND3P25-201ENST00000509243 135 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.75□□□□□ -2.53
UBA52P62987 AC023442.1-201ENST00000531247 422 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AC100830.2-201ENST00000581636 240 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 MIR5006-201ENST00000583027 110 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AC008608.1-201ENST00000603910 127 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AC246785.4-201ENST00000605374 287 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AC020891.4-201ENST00000605745 93 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AC108747.1-201ENST00000609508 535 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 AC008873.1-201ENST00000625051 138 ntBASIC-0.75□□□□□ -2.53
UBA52P62987 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.76□□□□□ -2.53
UBA52P62987 RNU6-137P-201ENST00000363680 108 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 RNU6-934P-201ENST00000365154 107 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 AL355143.1-201ENST00000407101 841 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 RNA5SP163-201ENST00000410304 99 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 USP9YP11-201ENST00000427537 717 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.76□□□□□ -2.53
UBA52P62987 AC074290.1-201ENST00000448883 135 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.76□□□□□ -2.53
UBA52P62987 AC026782.1-201ENST00000512952 449 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 RNU6-123P-201ENST00000516163 102 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 RNU6-180P-201ENST00000516697 61 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.76□□□□□ -2.53
UBA52P62987 AP001328.1-201ENST00000528550 176 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 AC103996.1-201ENST00000555468 102 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 MIR4771-2-201ENST00000577758 74 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 MIR4771-1-201ENST00000582617 74 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.76□□□□□ -2.53
UBA52P62987 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.76□□□□□ -2.53
UBA52P62987 MIR8084-201ENST00000614105 89 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.76□□□□□ -2.53
UBA52P62987 SNORD115-41-201ENST00000363608 82 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 SNORD45.3-201ENST00000363836 72 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 MIR891A-201ENST00000401237 79 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 MIR320C1-201ENST00000408566 88 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 RNU4-30P-201ENST00000410245 143 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 PCNPP5-201ENST00000452246 481 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 RPL39P34-201ENST00000477141 156 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 MIR2115-201ENST00000516657 100 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 AC026470.2-201ENST00000561492 181 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 AC144521.1-201ENST00000607148 956 ntBASIC-0.77□□□□□ -2.53
UBA52P62987 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.77□□□□□ -2.53
UBA52P62987 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.77□□□□□ -2.53
UBA52P62987 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.77□□□□□ -2.53
UBA52P62987 MIR377-201ENST00000362145 69 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 SNORA72.1-201ENST00000363485 129 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 MIR1284-201ENST00000408337 120 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 RNU2-62P-201ENST00000410868 191 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 SNX3P1X-201ENST00000414887 175 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.78□□□□□ -2.53
UBA52P62987 RPS24P1-201ENST00000438550 371 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.78□□□□□ -2.53
UBA52P62987 RPS29P15-201ENST00000458329 171 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 RNU6-897P-201ENST00000517135 105 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 AC104383.1-201ENST00000530297 370 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.78□□□□□ -2.53
UBA52P62987 ADI1P3-201ENST00000549509 470 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.78□□□□□ -2.53
UBA52P62987 FRG2DP-202ENST00000566967 323 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 MIR3681-201ENST00000580089 72 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 AC012433.1-201ENST00000588916 398 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 AC010525.2-201ENST00000590920 195 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 AC006504.8-201ENST00000621046 635 ntBASIC-0.78□□□□□ -2.53
UBA52P62987 SNORA1B-201ENST00000362535 133 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 SNORD14.1-201ENST00000365609 90 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 RNU6-25P-201ENST00000383873 107 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 RNU6-207P-201ENST00000384137 107 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 RNU6-15P-201ENST00000384534 107 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 RNU6-29P-201ENST00000384637 107 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 RNA5SP482-201ENST00000391269 118 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 AC087499.4-201ENST00000448505 178 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 RPS29P27-201ENST00000463711 170 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 AC007215.1-201ENST00000464893 276 ntBASIC-0.79□□□□□ -2.54
UBA52P62987 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.79□□□□□ -2.54
UBA52P62987 MTCO3P27-201ENST00000514397 196 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms