Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNA5SP128-201ENST00000365305 116 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 SNORA20.2-201ENST00000383922 131 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 MIR644A-201ENST00000385262 94 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 RNU2-59P-201ENST00000410482 191 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 AC005178.1-201ENST00000508392 440 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 RNU7-129P-201ENST00000516128 62 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 SNORA40.12-201ENST00000516329 111 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 AC141557.1-201ENST00000540982 400 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.44□□□□□ -2.48
LSM3P62310 AC005771.1-201ENST00000585581 349 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 BNIP3P39-201ENST00000601077 554 ntBASIC-0.44□□□□□ -2.48
LSM3P62310 RNU6-227P-201ENST00000362865 103 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 RNU6-727P-201ENST00000363592 107 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 SNORD45.3-201ENST00000363836 72 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 AL390729.2-201ENST00000416137 156 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.45□□□□□ -2.48
LSM3P62310 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.45□□□□□ -2.48
LSM3P62310 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.45□□□□□ -2.48
LSM3P62310 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.45□□□□□ -2.48
LSM3P62310 AC105185.1-201ENST00000518705 535 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
LSM3P62310 AC016957.1-201ENST00000534895 309 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 AC020891.4-201ENST00000605745 93 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 AL158211.2-201ENST00000607282 395 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 MIR4251-201ENST00000635819 61 ntBASIC-0.45□□□□□ -2.48
LSM3P62310 MTND5P17-201ENST00000418405 1603 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 RNU6-934P-201ENST00000365154 107 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.46□□□□□ -2.48
LSM3P62310 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.46□□□□□ -2.48
LSM3P62310 AC069271.1-201ENST00000445577 156 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.46□□□□□ -2.48
LSM3P62310 USP9YP25-201ENST00000457708 443 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 RPS29P15-201ENST00000458329 171 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 RNU7-56P-201ENST00000458744 62 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.46□□□□□ -2.48
LSM3P62310 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.46□□□□□ -2.48
LSM3P62310 MTND2P32-201ENST00000521584 1038 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 MIR4676-201ENST00000583078 72 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 MIR6734-201ENST00000621166 68 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 MTND4P4-201ENST00000439033 1366 ntBASIC-0.46□□□□□ -2.48
LSM3P62310 RNU6-931P-201ENST00000363850 107 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 RNU6-434P-201ENST00000384376 107 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 SNORD100-201ENST00000408573 76 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.47□□□□□ -2.48
LSM3P62310 MTND1P4-201ENST00000435196 415 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 AC104850.1-201ENST00000435940 476 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.47□□□□□ -2.48
LSM3P62310 AL359672.1-201ENST00000442302 409 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 MTCO2P3-201ENST00000442543 421 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 SUMO1P2-201ENST00000452524 304 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 RNU7-43P-201ENST00000516554 64 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 AC090572.1-201ENST00000519251 160 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.47□□□□□ -2.48
LSM3P62310 MIR4775-201ENST00000581168 75 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 AC008608.1-201ENST00000603910 127 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 AC027279.3-201ENST00000625055 122 ntBASIC-0.47□□□□□ -2.48
LSM3P62310 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.47□□□□□ -2.48
LSM3P62310 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.48□□□□□ -2.49
LSM3P62310 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 MTCO3P19-201ENST00000415864 321 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 EPS15P1-201ENST00000448836 336 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 SNORD123-201ENST00000459473 70 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.48□□□□□ -2.49
LSM3P62310 MIR2115-201ENST00000516657 100 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 RNU6-63P-201ENST00000516690 95 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 RPL21P9-201ENST00000556149 474 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 AL359999.1-201ENST00000604513 294 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 AC022709.1-201ENST00000615967 87 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 AC010487.4-201ENST00000637027 61 ntBASIC-0.48□□□□□ -2.49
LSM3P62310 SNORD68-201ENST00000363214 84 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 RNY1P12-201ENST00000364251 105 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 SNORA2A-201ENST00000383885 135 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 RNU6-187P-201ENST00000384139 106 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 MIR136-201ENST00000385207 82 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 RNU6-205P-201ENST00000390858 107 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 MIR320B2-201ENST00000408479 138 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 AC243428.1-201ENST00000421099 264 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 AC016550.1-201ENST00000505348 785 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 RNA5SP220-201ENST00000516298 104 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 AC133485.4-201ENST00000561835 220 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 AC099654.13-201ENST00000639774 207 ntBASIC-0.49□□□□□ -2.49
LSM3P62310 RNU6-302P-201ENST00000365249 107 ntBASIC-0.5□□□□□ -2.49
LSM3P62310 RNU6-376P-201ENST00000384731 106 ntBASIC-0.5□□□□□ -2.49
LSM3P62310 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.5□□□□□ -2.49
LSM3P62310 RNU6-747P-201ENST00000390928 104 ntBASIC-0.5□□□□□ -2.49
LSM3P62310 RNU6-241P-201ENST00000391148 104 ntBASIC-0.5□□□□□ -2.49
LSM3P62310 RNU4-46P-201ENST00000410818 138 ntBASIC-0.5□□□□□ -2.49
LSM3P62310 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms