Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN2P57739 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN2P57739 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN2P57739 RNU6-1266P-201ENST00000362794 105 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 Y_RNA.152-201ENST00000363578 100 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 RNU6-961P-201ENST00000363893 105 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 RNA5SP493-201ENST00000364115 91 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 RNU6-450P-201ENST00000364654 107 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 Y_RNA.462-201ENST00000384268 102 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 Y_RNA.527-201ENST00000384573 102 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 RNU2-2P-201ENST00000410396 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.07□□□□□ -2.08
CLDN2P57739 AL445646.1-201ENST00000431784 216 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN2P57739 RNU6-764P-201ENST00000516396 105 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 AC025647.1-201ENST00000517879 253 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 MIR3169-201ENST00000578032 83 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 AL021879.1-201ENST00000611756 288 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.20-201ENST00000613956 192 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 AL590240.4-201ENST00000616908 390 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN2P57739 AL159152.1-201ENST00000635019 2587 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
CLDN2P57739 RNU6-626P-201ENST00000363354 107 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 MIR606-201ENST00000384851 96 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 AL390729.2-201ENST00000416137 156 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 BX510359.4-201ENST00000423750 193 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 AC073910.1-201ENST00000445047 438 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 AC011753.1-201ENST00000451001 220 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 snoU13.23-201ENST00000458863 104 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 RNU6-1137P-201ENST00000517073 99 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 AC015712.3-201ENST00000559380 164 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 AC005176.2-201ENST00000596933 147 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 AL049779.4-201ENST00000604500 156 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 AL353621.2-201ENST00000605340 133 ntBASIC2.06□□□□□ -2.08
CLDN2P57739 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN2P57739 AC005336.3-201ENST00000623833 2679 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLDN2P57739 Y_RNA.276-201ENST00000364732 109 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 SNORA72.2-201ENST00000365028 127 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 RNU6-1240P-201ENST00000365155 104 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 RNU6-20P-201ENST00000384106 107 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 SNORD63-201ENST00000384262 68 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 RNU11-3P-201ENST00000391111 133 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 SNORD23.1-201ENST00000408212 104 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 MIR1283-2-201ENST00000408621 87 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 RNU5A-5P-201ENST00000411054 116 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 AL139156.1-201ENST00000412785 841 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 SUMO1P2-201ENST00000452524 304 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 HMGB3P3-201ENST00000510526 400 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 RNU6-1146P-201ENST00000516282 102 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 SUMO2P18-201ENST00000518873 252 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN2P57739 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN2P57739 AC005786.1-201ENST00000588553 154 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 AL353149.1-201ENST00000610667 244 ntBASIC2.05□□□□□ -2.08
CLDN2P57739 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLDN2P57739 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLDN2P57739 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
CLDN2P57739 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN2P57739 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN2P57739 AC060773.1-201ENST00000421698 310 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 AC005002.2-201ENST00000438228 269 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 ATP5J2P3-201ENST00000451550 258 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN2P57739 AC108210.2-201ENST00000503681 201 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 AC011406.1-201ENST00000512440 370 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 RNU6-237P-201ENST00000515985 71 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 AP002001.1-203ENST00000534002 267 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CLDN2P57739 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.04□□□□□ -2.08
CLDN2P57739 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN2P57739 DEFB122-202ENST00000569013 197 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 MIR4423-201ENST00000580922 80 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 PART1_1.1-201ENST00000611761 217 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 AC004467.1-201ENST00000615678 330 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 AC006001.4-201ENST00000622243 395 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 MIR203B-201ENST00000636080 86 ntBASIC2.04□□□□□ -2.08
CLDN2P57739 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN2P57739 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN2P57739 Y_RNA.145-201ENST00000363527 102 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 Y_RNA.183-201ENST00000363882 113 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 RNU6-738P-201ENST00000384531 106 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 RNU6-130P-201ENST00000411112 103 ntBASIC2.03□□□□□ -2.08
CLDN2P57739 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN2P57739 CR769767.1-201ENST00000436337 346 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms