Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL135786.1-201ENST00000415892 214 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 CST9LP2-201ENST00000437612 320 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 AP001486.1-201ENST00000463339 476 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.9□□□□□ -1.95
GFRA1P56159 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 MIR3133-201ENST00000583157 78 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 MIR4438-201ENST00000585271 93 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 POLR3GP1-201ENST00000594073 261 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 AC104465.1-201ENST00000611365 139 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
GFRA1P56159 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
GFRA1P56159 AC068700.1-201ENST00000565862 3754 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GFRA1P56159 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
GFRA1P56159 Y_RNA.23-201ENST00000362496 106 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GFRA1P56159 Y_RNA.441-201ENST00000384123 112 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 AC092427.1-202ENST00000430569 476 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 AL392103.1-201ENST00000447000 198 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.89□□□□□ -1.95
GFRA1P56159 RN7SL863P-201ENST00000462370 296 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 SNORA74D-201ENST00000516404 141 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 RNU6-63P-201ENST00000516690 95 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.89□□□□□ -1.95
GFRA1P56159 AC127455.1-201ENST00000565496 145 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 MIR3144-201ENST00000579460 79 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 MIR4744-201ENST00000581563 82 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 AC108706.1-201ENST00000611053 297 ntBASIC2.89□□□□□ -1.95
GFRA1P56159 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
GFRA1P56159 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GFRA1P56159 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.88□□□□□ -1.95
GFRA1P56159 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
GFRA1P56159 Y_RNA.8-201ENST00000362353 102 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 RNA5SP374-201ENST00000362939 125 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 Y_RNA.99-201ENST00000363138 105 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 snoU2_19.4-201ENST00000364329 80 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 RNU6-275P-201ENST00000364910 107 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 Y_RNA.357-201ENST00000365487 109 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 SNORA7.4-201ENST00000384249 137 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 RNU6-804P-201ENST00000384286 107 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 Y_RNA.506-201ENST00000384494 102 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
GFRA1P56159 RNU6-394P-201ENST00000410735 107 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 HMGN2P34-201ENST00000437647 269 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 RPL23AP54-201ENST00000495129 419 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 RPS29P21-201ENST00000496272 170 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 AC005840.1-201ENST00000498412 377 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.88□□□□□ -1.95
GFRA1P56159 AC097462.1-201ENST00000514125 324 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 RNU7-172P-201ENST00000517125 64 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 uc_338.25-201ENST00000613756 156 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 AC091953.5-201ENST00000622919 233 ntBASIC2.88□□□□□ -1.95
GFRA1P56159 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.88□□□□□ -1.95
GFRA1P56159 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.88□□□□□ -1.95
GFRA1P56159 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
GFRA1P56159 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
GFRA1P56159 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
GFRA1P56159 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
GFRA1P56159 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.88□□□□□ -1.95
GFRA1P56159 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
GFRA1P56159 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
GFRA1P56159 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.87□□□□□ -1.95
GFRA1P56159 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
GFRA1P56159 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GFRA1P56159 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.87□□□□□ -1.95
GFRA1P56159 RNU1-22P-201ENST00000363334 158 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 Y_RNA.170-201ENST00000363746 110 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 RNU6-1180P-201ENST00000364935 107 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 RNU6-117P-201ENST00000365415 107 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 MIR483-201ENST00000385070 76 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 MIR616-201ENST00000385293 97 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 RNU6-1135P-201ENST00000411083 103 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 AL162725.1-201ENST00000435405 301 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 AC104389.3-201ENST00000445629 235 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 AC010401.1-201ENST00000463867 348 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 RNU6-1007P-201ENST00000516586 107 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 NDUFA5P6-201ENST00000542110 379 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.87□□□□□ -1.95
GFRA1P56159 AL391903.3-201ENST00000612158 163 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 U2.20-201ENST00000613956 192 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 AC073476.4-201ENST00000628409 72 ntBASIC2.87□□□□□ -1.95
GFRA1P56159 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
GFRA1P56159 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GFRA1P56159 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
GFRA1P56159 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
GFRA1P56159 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
GFRA1P56159 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.87□□□□□ -1.95
GFRA1P56159 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
GFRA1P56159 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GFRA1P56159 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.86□□□□□ -1.95
GFRA1P56159 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.86□□□□□ -1.95
GFRA1P56159 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
GFRA1P56159 MIR340-201ENST00000362125 95 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 Y_RNA.272-201ENST00000364696 102 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 RNU6-125P-201ENST00000384505 107 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 RNU6-376P-201ENST00000384731 106 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 RNU6-578P-201ENST00000390980 103 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 RNA5SP511-201ENST00000410487 115 ntBASIC2.86□□□□□ -1.95
GFRA1P56159 RNU5E-9P-201ENST00000411164 104 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms