Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL133216.2-202ENST00000634512 349 ntBASIC1.07□□□□□ -2.24
CDH4P55283 MTND4P12-201ENST00000498999 1377 ntBASIC1.07□□□□□ -2.24
CDH4P55283 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDH4P55283 RNU6-137P-201ENST00000363680 108 ntBASIC1.06□□□□□ -2.24
CDH4P55283 Y_RNA.319-201ENST00000365138 92 ntBASIC1.06□□□□□ -2.24
CDH4P55283 RNU6-17P-201ENST00000384245 107 ntBASIC1.06□□□□□ -2.24
CDH4P55283 RNU6-18P-201ENST00000384527 107 ntBASIC1.06□□□□□ -2.24
CDH4P55283 RNU6-1031P-201ENST00000384773 107 ntBASIC1.06□□□□□ -2.24
CDH4P55283 MIR153-2-201ENST00000385225 87 ntBASIC1.06□□□□□ -2.24
CDH4P55283 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.06□□□□□ -2.24
CDH4P55283 AC243428.1-201ENST00000421099 264 ntBASIC1.06□□□□□ -2.24
CDH4P55283 AL445305.1-201ENST00000432577 575 ntBASIC1.06□□□□□ -2.24
CDH4P55283 AC005002.2-201ENST00000438228 269 ntBASIC1.06□□□□□ -2.24
CDH4P55283 RPS27P1-201ENST00000450552 247 ntBASIC1.06□□□□□ -2.24
CDH4P55283 HSPE1P13-201ENST00000451143 297 ntBASIC1.06□□□□□ -2.24
CDH4P55283 ACA59.1-201ENST00000515966 143 ntBASIC1.06□□□□□ -2.24
CDH4P55283 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
CDH4P55283 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.06□□□□□ -2.24
CDH4P55283 AC012557.2-201ENST00000605919 418 ntBASIC1.06□□□□□ -2.24
CDH4P55283 SNORD11B-201ENST00000607707 90 ntBASIC1.06□□□□□ -2.24
CDH4P55283 AC009248.2-201ENST00000619826 254 ntBASIC1.06□□□□□ -2.24
CDH4P55283 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.06□□□□□ -2.24
CDH4P55283 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CDH4P55283 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDH4P55283 RNU6-873P-201ENST00000363833 107 ntBASIC1.05□□□□□ -2.24
CDH4P55283 SNORD87-201ENST00000364849 89 ntBASIC1.05□□□□□ -2.24
CDH4P55283 RNU4-12P-201ENST00000365233 139 ntBASIC1.05□□□□□ -2.24
CDH4P55283 RNU6-159P-201ENST00000391080 106 ntBASIC1.05□□□□□ -2.24
CDH4P55283 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CDH4P55283 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH4P55283 MTATP6P13-201ENST00000438531 667 ntBASIC1.05□□□□□ -2.24
CDH4P55283 SNORA25.14-201ENST00000516481 132 ntBASIC1.05□□□□□ -2.24
CDH4P55283 SNORA31.10-201ENST00000516482 106 ntBASIC1.05□□□□□ -2.24
CDH4P55283 RNU6-1198P-201ENST00000516904 67 ntBASIC1.05□□□□□ -2.24
CDH4P55283 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
CDH4P55283 UBL5P4-201ENST00000562584 236 ntBASIC1.05□□□□□ -2.24
CDH4P55283 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH4P55283 AC090517.2-201ENST00000614966 680 ntBASIC1.05□□□□□ -2.24
CDH4P55283 AC100810.6-201ENST00000638068 285 ntBASIC1.05□□□□□ -2.24
CDH4P55283 Y_RNA.301-201ENST00000364990 103 ntBASIC1.04□□□□□ -2.24
CDH4P55283 RNU6-596P-201ENST00000365395 98 ntBASIC1.04□□□□□ -2.24
CDH4P55283 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
CDH4P55283 RNU6-1080P-201ENST00000383982 107 ntBASIC1.04□□□□□ -2.24
CDH4P55283 SNORA25-201ENST00000384384 134 ntBASIC1.04□□□□□ -2.24
CDH4P55283 Y_RNA.533-201ENST00000384596 114 ntBASIC1.04□□□□□ -2.24
CDH4P55283 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
CDH4P55283 MIR1185-2-201ENST00000408687 86 ntBASIC1.04□□□□□ -2.24
CDH4P55283 RNU6-1186P-201ENST00000410429 97 ntBASIC1.04□□□□□ -2.24
CDH4P55283 RN7SKP200-201ENST00000410564 320 ntBASIC1.04□□□□□ -2.24
CDH4P55283 RNA5SP247-201ENST00000411181 105 ntBASIC1.04□□□□□ -2.24
CDH4P55283 MTND1P17-201ENST00000448961 204 ntBASIC1.04□□□□□ -2.24
CDH4P55283 NDUFB4P10-201ENST00000452541 359 ntBASIC1.04□□□□□ -2.24
CDH4P55283 AC091179.3-201ENST00000474761 144 ntBASIC1.04□□□□□ -2.24
CDH4P55283 RNU6-273P-201ENST00000516937 96 ntBASIC1.04□□□□□ -2.24
CDH4P55283 RNA5SP454-201ENST00000517231 127 ntBASIC1.04□□□□□ -2.24
CDH4P55283 AC022217.4-201ENST00000604389 163 ntBASIC1.04□□□□□ -2.24
CDH4P55283 BX284668.6-201ENST00000606899 438 ntBASIC1.04□□□□□ -2.24
CDH4P55283 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.04□□□□□ -2.24
CDH4P55283 U4.5-201ENST00000617137 123 ntBASIC1.04□□□□□ -2.24
CDH4P55283 MIR3688-2-201ENST00000636963 87 ntBASIC1.04□□□□□ -2.24
CDH4P55283 Y_RNA.157-201ENST00000363638 102 ntBASIC1.03□□□□□ -2.24
CDH4P55283 U3.8-201ENST00000363675 217 ntBASIC1.03□□□□□ -2.24
CDH4P55283 RNU6-1059P-201ENST00000363752 98 ntBASIC1.03□□□□□ -2.24
CDH4P55283 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
CDH4P55283 Y_RNA.295-201ENST00000364918 102 ntBASIC1.03□□□□□ -2.24
CDH4P55283 Y_RNA.415-201ENST00000384012 112 ntBASIC1.03□□□□□ -2.24
CDH4P55283 MIR222-201ENST00000384992 110 ntBASIC1.03□□□□□ -2.24
CDH4P55283 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
CDH4P55283 RNA5SP118-201ENST00000410385 109 ntBASIC1.03□□□□□ -2.24
CDH4P55283 RPL30P16-201ENST00000419341 429 ntBASIC1.03□□□□□ -2.24
CDH4P55283 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH4P55283 AC245047.3-201ENST00000429428 127 ntBASIC1.03□□□□□ -2.24
CDH4P55283 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.03□□□□□ -2.24
CDH4P55283 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH4P55283 RNU6-566P-201ENST00000516790 107 ntBASIC1.03□□□□□ -2.24
CDH4P55283 RNU7-128P-201ENST00000517247 62 ntBASIC1.03□□□□□ -2.24
CDH4P55283 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.03□□□□□ -2.24
CDH4P55283 MIR8054-201ENST00000620877 86 ntBASIC1.03□□□□□ -2.24
CDH4P55283 RNU6-727P-201ENST00000363592 107 ntBASIC1.02□□□□□ -2.25
CDH4P55283 RNU6-595P-201ENST00000363944 107 ntBASIC1.02□□□□□ -2.25
CDH4P55283 SNORA25.9-201ENST00000365087 128 ntBASIC1.02□□□□□ -2.25
CDH4P55283 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
CDH4P55283 RNU6-842P-201ENST00000384269 107 ntBASIC1.02□□□□□ -2.25
CDH4P55283 MIR10B-201ENST00000385011 110 ntBASIC1.02□□□□□ -2.25
CDH4P55283 SNORD115-47-201ENST00000391226 86 ntBASIC1.02□□□□□ -2.25
CDH4P55283 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH4P55283 USP9YP30-201ENST00000430729 455 ntBASIC1.02□□□□□ -2.25
CDH4P55283 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.02□□□□□ -2.25
CDH4P55283 RPL39P38-201ENST00000467018 153 ntBASIC1.02□□□□□ -2.25
CDH4P55283 AP000870.1-201ENST00000472927 406 ntBASIC1.02□□□□□ -2.25
CDH4P55283 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH4P55283 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
CDH4P55283 FRG2DP-202ENST00000566967 323 ntBASIC1.02□□□□□ -2.25
CDH4P55283 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
CDH4P55283 AL021879.1-201ENST00000611756 288 ntBASIC1.02□□□□□ -2.25
CDH4P55283 MIR3662-201ENST00000637030 95 ntBASIC1.02□□□□□ -2.25
CDH4P55283 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH4P55283 Y_RNA.226-201ENST00000364337 114 ntBASIC1.01□□□□□ -2.25
CDH4P55283 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.01□□□□□ -2.25
CDH4P55283 Y_RNA.405-201ENST00000383979 100 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms