Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.16□□□□□ -2.06
NR1H2P55055 RNU6-717P-201ENST00000459076 104 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 RNU7-57P-201ENST00000459540 60 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 RNU6-237P-201ENST00000515985 71 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 RNU6-1137P-201ENST00000517073 99 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.16□□□□□ -2.06
NR1H2P55055 AC240442.1-201ENST00000616055 283 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 U3.8-201ENST00000363675 217 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 RNU4-50P-201ENST00000364361 141 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 SNORA8-201ENST00000384574 139 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 MIR518C-201ENST00000384822 101 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 RNA5SP425-201ENST00000410336 112 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NR1H2P55055 AC008134.1-201ENST00000420943 193 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 AC244636.1-201ENST00000421152 228 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 SDAD1P3-201ENST00000427380 333 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 AL356320.1-201ENST00000429616 163 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.15□□□□□ -2.07
NR1H2P55055 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.15□□□□□ -2.07
NR1H2P55055 snoU13.15-201ENST00000459407 104 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 MRPS17P9-201ENST00000511924 393 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 AC074133.1-201ENST00000515696 183 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 RNU6-408P-201ENST00000515910 100 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NR1H2P55055 AC018448.1-201ENST00000552843 316 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 AC022432.1-201ENST00000595739 310 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 AL390123.1-201ENST00000603216 237 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 AC099654.10-201ENST00000640395 161 ntBASIC2.15□□□□□ -2.07
NR1H2P55055 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NR1H2P55055 Y_RNA.422-201ENST00000384054 114 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 Y_RNA.458-201ENST00000384240 102 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.14□□□□□ -2.07
NR1H2P55055 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 RNU6-625P-201ENST00000459412 107 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 AC234781.5-201ENST00000508429 271 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 Y_RNA.721-201ENST00000517207 102 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 AC022616.4-201ENST00000522985 181 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.14□□□□□ -2.07
NR1H2P55055 AC006504.6-201ENST00000590142 199 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.14□□□□□ -2.07
NR1H2P55055 AL353149.1-201ENST00000610667 244 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 snoZ196.1-201ENST00000625269 89 ntBASIC2.14□□□□□ -2.07
NR1H2P55055 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NR1H2P55055 RNU6-961P-201ENST00000363893 105 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 Y_RNA.455-201ENST00000384230 98 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 Y_RNA.471-201ENST00000384312 102 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 MIR1289-2-201ENST00000408360 111 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 RNA5SP338-201ENST00000410495 85 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.13□□□□□ -2.07
NR1H2P55055 RNA5SP57-201ENST00000459463 123 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.13□□□□□ -2.07
NR1H2P55055 MIR514B-201ENST00000516774 80 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.13□□□□□ -2.07
NR1H2P55055 MIR4299-201ENST00000577899 72 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.13□□□□□ -2.07
NR1H2P55055 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 AL121655.1-201ENST00000605811 308 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.13□□□□□ -2.07
NR1H2P55055 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.13□□□□□ -2.07
NR1H2P55055 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NR1H2P55055 AC245060.5-201ENST00000610778 3293 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 MIR606-201ENST00000384851 96 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 MIR515-2-201ENST00000384883 83 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 MIR515-1-201ENST00000384884 83 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 MRPL35P1-201ENST00000404272 572 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 RNU6-57P-201ENST00000411348 103 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.12□□□□□ -2.07
NR1H2P55055 RPL26P26-201ENST00000480251 434 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 Y_RNA.715-201ENST00000517082 110 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 AC021269.2-201ENST00000532318 330 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 AC091932.3-201ENST00000624223 323 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.12□□□□□ -2.07
NR1H2P55055 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.12□□□□□ -2.07
NR1H2P55055 RNU6-1264P-201ENST00000383891 107 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 Y_RNA.551-201ENST00000384661 102 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 AL079342.1-201ENST00000401460 267 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 MIR1185-2-201ENST00000408687 86 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 MIR1252-201ENST00000408861 65 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 RNU6-985P-201ENST00000410182 104 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 AC113618.1-201ENST00000416747 285 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 RAB28P5-201ENST00000427490 651 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 RPEP5-201ENST00000441137 268 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 U8.20-201ENST00000459445 131 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 AC011406.1-201ENST00000512440 370 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 SCARNA15.1-201ENST00000516384 125 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 RNU6-764P-201ENST00000516396 105 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 MIR4648-201ENST00000580107 72 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 Y_RNA.772-201ENST00000606692 102 ntBASIC2.11□□□□□ -2.07
NR1H2P55055 AC010205.1-201ENST00000616668 449 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms