Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 Y_RNA.485-201ENST00000384395 102 ntBASIC1.84□□□□□ -2.11
PDX1P52945 MIR628-201ENST00000385229 95 ntBASIC1.84□□□□□ -2.11
PDX1P52945 SNORA40.19-201ENST00000390846 128 ntBASIC1.84□□□□□ -2.11
PDX1P52945 SNORD12B-201ENST00000410433 91 ntBASIC1.84□□□□□ -2.11
PDX1P52945 RPS20P15-201ENST00000412792 311 ntBASIC1.84□□□□□ -2.11
PDX1P52945 PMCHL1-202ENST00000423102 261 ntBASIC1.84□□□□□ -2.11
PDX1P52945 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.84□□□□□ -2.11
PDX1P52945 SNORA40.9-201ENST00000515895 93 ntBASIC1.84□□□□□ -2.11
PDX1P52945 Y_RNA.673-201ENST00000516306 88 ntBASIC1.84□□□□□ -2.11
PDX1P52945 AL442163.3-201ENST00000554110 156 ntBASIC1.84□□□□□ -2.11
PDX1P52945 MIR4498-201ENST00000577599 66 ntBASIC1.84□□□□□ -2.11
PDX1P52945 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.84□□□□□ -2.11
PDX1P52945 AC083806.3-201ENST00000614016 455 ntBASIC1.84□□□□□ -2.11
PDX1P52945 AC006001.4-201ENST00000622243 395 ntBASIC1.84□□□□□ -2.11
PDX1P52945 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.84□□□□□ -2.11
PDX1P52945 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
PDX1P52945 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PDX1P52945 U3.8-201ENST00000363675 217 ntBASIC1.83□□□□□ -2.12
PDX1P52945 RNU1-115P-201ENST00000365329 160 ntBASIC1.83□□□□□ -2.12
PDX1P52945 RNU6-926P-201ENST00000384075 107 ntBASIC1.83□□□□□ -2.12
PDX1P52945 RNY3P4-201ENST00000384428 101 ntBASIC1.83□□□□□ -2.12
PDX1P52945 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
PDX1P52945 RNA5SP247-201ENST00000411181 105 ntBASIC1.83□□□□□ -2.12
PDX1P52945 AL354751.2-201ENST00000415471 210 ntBASIC1.83□□□□□ -2.12
PDX1P52945 MCFD2P1-201ENST00000417812 300 ntBASIC1.83□□□□□ -2.12
PDX1P52945 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.83□□□□□ -2.12
PDX1P52945 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
PDX1P52945 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.83□□□□□ -2.12
PDX1P52945 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.83□□□□□ -2.12
PDX1P52945 RNVU1-2-201ENST00000516326 135 ntBASIC1.83□□□□□ -2.12
PDX1P52945 RNU2-34P-201ENST00000516534 121 ntBASIC1.83□□□□□ -2.12
PDX1P52945 MIR2355-201ENST00000517199 87 ntBASIC1.83□□□□□ -2.12
PDX1P52945 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.83□□□□□ -2.12
PDX1P52945 GNAI2P1-201ENST00000541815 315 ntBASIC1.83□□□□□ -2.12
PDX1P52945 MIR5188-201ENST00000583467 113 ntBASIC1.83□□□□□ -2.12
PDX1P52945 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.83□□□□□ -2.12
PDX1P52945 AC006157.1-201ENST00000611750 366 ntBASIC1.83□□□□□ -2.12
PDX1P52945 AL162373.1-201ENST00000620433 407 ntBASIC1.83□□□□□ -2.12
PDX1P52945 snoZ196.1-201ENST00000625269 89 ntBASIC1.83□□□□□ -2.12
PDX1P52945 U6.92-201ENST00000636464 89 ntBASIC1.83□□□□□ -2.12
PDX1P52945 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
PDX1P52945 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.82□□□□□ -2.12
PDX1P52945 Y_RNA.148-201ENST00000363557 117 ntBASIC1.82□□□□□ -2.12
PDX1P52945 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PDX1P52945 MTCO2P12-201ENST00000427426 682 ntBASIC1.82□□□□□ -2.12
PDX1P52945 MTND2P29-201ENST00000438595 412 ntBASIC1.82□□□□□ -2.12
PDX1P52945 NDUFB4P10-201ENST00000452541 359 ntBASIC1.82□□□□□ -2.12
PDX1P52945 SNORD13-201ENST00000459299 104 ntBASIC1.82□□□□□ -2.12
PDX1P52945 RNU6-221P-201ENST00000459541 99 ntBASIC1.82□□□□□ -2.12
PDX1P52945 AC010469.2-201ENST00000496412 480 ntBASIC1.82□□□□□ -2.12
PDX1P52945 RNU6-1041P-201ENST00000516254 102 ntBASIC1.82□□□□□ -2.12
PDX1P52945 RNU6-948P-201ENST00000516374 107 ntBASIC1.82□□□□□ -2.12
PDX1P52945 RNU6-107P-201ENST00000516643 102 ntBASIC1.82□□□□□ -2.12
PDX1P52945 RNU6-1153P-201ENST00000516760 105 ntBASIC1.82□□□□□ -2.12
PDX1P52945 RN7SKP295-201ENST00000517264 153 ntBASIC1.82□□□□□ -2.12
PDX1P52945 MIR3683-201ENST00000580847 82 ntBASIC1.82□□□□□ -2.12
PDX1P52945 VN1R91P-201ENST00000594377 169 ntBASIC1.82□□□□□ -2.12
PDX1P52945 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.82□□□□□ -2.12
PDX1P52945 AC011476.5-201ENST00000615594 130 ntBASIC1.82□□□□□ -2.12
PDX1P52945 AL606534.2-204ENST00000635008 178 ntBASIC1.82□□□□□ -2.12
PDX1P52945 AL359851.1-201ENST00000569460 4997 ntBASIC1.82□□□□□ -2.12
PDX1P52945 ZNF702P-202ENST00000434269 1966 ntBASIC1.81□□□□□ -2.12
PDX1P52945 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.81□□□□□ -2.12
PDX1P52945 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDX1P52945 Y_RNA.39-201ENST00000362620 98 ntBASIC1.81□□□□□ -2.12
PDX1P52945 SNORA33-201ENST00000363664 130 ntBASIC1.81□□□□□ -2.12
PDX1P52945 Y_RNA.216-201ENST00000364205 93 ntBASIC1.81□□□□□ -2.12
PDX1P52945 AL117342.1-201ENST00000404861 406 ntBASIC1.81□□□□□ -2.12
PDX1P52945 MIR1185-2-201ENST00000408687 86 ntBASIC1.81□□□□□ -2.12
PDX1P52945 RPL23AP36-201ENST00000413895 458 ntBASIC1.81□□□□□ -2.12
PDX1P52945 AC099677.2-201ENST00000436385 175 ntBASIC1.81□□□□□ -2.12
PDX1P52945 AL353689.1-201ENST00000438895 199 ntBASIC1.81□□□□□ -2.12
PDX1P52945 MTND4P19-201ENST00000446659 478 ntBASIC1.81□□□□□ -2.12
PDX1P52945 AC074290.1-201ENST00000448883 135 ntBASIC1.81□□□□□ -2.12
PDX1P52945 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.81□□□□□ -2.12
PDX1P52945 ATP5J2P3-201ENST00000451550 258 ntBASIC1.81□□□□□ -2.12
PDX1P52945 RPL26P26-201ENST00000480251 434 ntBASIC1.81□□□□□ -2.12
PDX1P52945 AC011406.1-201ENST00000512440 370 ntBASIC1.81□□□□□ -2.12
PDX1P52945 RNU6-911P-201ENST00000516523 104 ntBASIC1.81□□□□□ -2.12
PDX1P52945 AC025647.1-201ENST00000517879 253 ntBASIC1.81□□□□□ -2.12
PDX1P52945 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
PDX1P52945 AC018448.1-201ENST00000552843 316 ntBASIC1.81□□□□□ -2.12
PDX1P52945 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.81□□□□□ -2.12
PDX1P52945 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.81□□□□□ -2.12
PDX1P52945 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PDX1P52945 Y_RNA.164-201ENST00000363709 102 ntBASIC1.8□□□□□ -2.12
PDX1P52945 RNU6-961P-201ENST00000363893 105 ntBASIC1.8□□□□□ -2.12
PDX1P52945 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
PDX1P52945 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
PDX1P52945 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PDX1P52945 AL627390.1-201ENST00000396055 340 ntBASIC1.8□□□□□ -2.12
PDX1P52945 RNU2-20P-201ENST00000410425 191 ntBASIC1.8□□□□□ -2.12
PDX1P52945 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
PDX1P52945 RAB28P5-201ENST00000427490 651 ntBASIC1.8□□□□□ -2.12
PDX1P52945 HMGN2P34-201ENST00000437647 269 ntBASIC1.8□□□□□ -2.12
PDX1P52945 PCNPP5-201ENST00000452246 481 ntBASIC1.8□□□□□ -2.12
PDX1P52945 RNU6-625P-201ENST00000459412 107 ntBASIC1.8□□□□□ -2.12
PDX1P52945 RNU6-1012P-201ENST00000516606 109 ntBASIC1.8□□□□□ -2.12
PDX1P52945 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
PDX1P52945 SUMO2P18-201ENST00000518873 252 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms