Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SNORD45.3-201ENST00000363836 72 ntBASIC3.55□□□□□ -1.84
USP11P51784 RNU6-597P-201ENST00000365620 102 ntBASIC3.55□□□□□ -1.84
USP11P51784 SNORD116-13-201ENST00000384408 92 ntBASIC3.55□□□□□ -1.84
USP11P51784 SNORA48.2-201ENST00000390926 124 ntBASIC3.55□□□□□ -1.84
USP11P51784 AL355796.1-201ENST00000406706 323 ntBASIC3.55□□□□□ -1.84
USP11P51784 SNORA11.2-201ENST00000408318 127 ntBASIC3.55□□□□□ -1.84
USP11P51784 MIR1185-2-201ENST00000408687 86 ntBASIC3.55□□□□□ -1.84
USP11P51784 AL139281.1-201ENST00000422120 335 ntBASIC3.55□□□□□ -1.84
USP11P51784 AL031183.1-201ENST00000457667 207 ntBASIC3.55□□□□□ -1.84
USP11P51784 HSPE1P18-201ENST00000517602 280 ntBASIC3.55□□□□□ -1.84
USP11P51784 AC068657.1-201ENST00000520807 306 ntBASIC3.55□□□□□ -1.84
USP11P51784 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.55□□□□□ -1.84
USP11P51784 MIR4679-2-201ENST00000578358 77 ntBASIC3.55□□□□□ -1.84
USP11P51784 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.55□□□□□ -1.84
USP11P51784 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP11P51784 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
USP11P51784 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP11P51784 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP11P51784 AC010889.1-201ENST00000566193 2666 ntBASIC3.54□□□□□ -1.84
USP11P51784 Y_RNA.111-201ENST00000363248 100 ntBASIC3.54□□□□□ -1.84
USP11P51784 RNU6-1210P-201ENST00000363775 107 ntBASIC3.54□□□□□ -1.84
USP11P51784 RNU6-1305P-201ENST00000364353 104 ntBASIC3.54□□□□□ -1.84
USP11P51784 SNORA22-201ENST00000383907 134 ntBASIC3.54□□□□□ -1.84
USP11P51784 RNY3P5-201ENST00000384127 102 ntBASIC3.54□□□□□ -1.84
USP11P51784 RPS12P18-201ENST00000442381 270 ntBASIC3.54□□□□□ -1.84
USP11P51784 AC006445.1-201ENST00000491925 405 ntBASIC3.54□□□□□ -1.84
USP11P51784 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
USP11P51784 RNU6-1337P-201ENST00000516525 95 ntBASIC3.54□□□□□ -1.84
USP11P51784 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
USP11P51784 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP11P51784 AC069528.2-201ENST00000624849 1991 ntBASIC3.54□□□□□ -1.84
USP11P51784 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.54□□□□□ -1.84
USP11P51784 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.54□□□□□ -1.84
USP11P51784 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.53□□□□□ -1.84
USP11P51784 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.53□□□□□ -1.84
USP11P51784 RNA5SP374-201ENST00000362939 125 ntBASIC3.53□□□□□ -1.84
USP11P51784 Y_RNA.280-201ENST00000364765 112 ntBASIC3.53□□□□□ -1.84
USP11P51784 DYNLT3P1-201ENST00000378574 347 ntBASIC3.53□□□□□ -1.84
USP11P51784 RPL32P35-201ENST00000415214 394 ntBASIC3.53□□□□□ -1.84
USP11P51784 AC009969.1-201ENST00000438726 172 ntBASIC3.53□□□□□ -1.84
USP11P51784 SRIP1-201ENST00000489235 288 ntBASIC3.53□□□□□ -1.84
USP11P51784 MTND5P34-201ENST00000568888 325 ntBASIC3.53□□□□□ -1.84
USP11P51784 AP003357.1-201ENST00000604497 148 ntBASIC3.53□□□□□ -1.84
USP11P51784 AL138880.2-201ENST00000616214 239 ntBASIC3.53□□□□□ -1.84
USP11P51784 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.53□□□□□ -1.84
USP11P51784 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
USP11P51784 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
USP11P51784 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP11P51784 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP11P51784 RNU6-655P-201ENST00000362858 107 ntBASIC3.52□□□□□ -1.85
USP11P51784 RNU6-147P-201ENST00000383983 107 ntBASIC3.52□□□□□ -1.85
USP11P51784 MIR128-1-201ENST00000384921 82 ntBASIC3.52□□□□□ -1.85
USP11P51784 MIR586-201ENST00000385035 97 ntBASIC3.52□□□□□ -1.85
USP11P51784 Y_RNA.584-201ENST00000391090 114 ntBASIC3.52□□□□□ -1.85
USP11P51784 AL139095.1-201ENST00000404326 391 ntBASIC3.52□□□□□ -1.85
USP11P51784 RN7SKP220-201ENST00000410611 288 ntBASIC3.52□□□□□ -1.85
USP11P51784 RPL23AP7-203ENST00000449021 469 ntBASIC3.52□□□□□ -1.85
USP11P51784 RNU6-772P-201ENST00000516042 105 ntBASIC3.52□□□□□ -1.85
USP11P51784 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.52□□□□□ -1.85
USP11P51784 MIR378D2-201ENST00000580636 98 ntBASIC3.52□□□□□ -1.85
USP11P51784 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP11P51784 AC108081.1-201ENST00000604358 221 ntBASIC3.52□□□□□ -1.85
USP11P51784 AC004832.5-201ENST00000608677 401 ntBASIC3.52□□□□□ -1.85
USP11P51784 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.52□□□□□ -1.85
USP11P51784 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP11P51784 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
USP11P51784 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP11P51784 MIR148B-201ENST00000362252 99 ntBASIC3.51□□□□□ -1.85
USP11P51784 SNORD114-7-201ENST00000362520 77 ntBASIC3.51□□□□□ -1.85
USP11P51784 SNORA51.4-201ENST00000364993 124 ntBASIC3.51□□□□□ -1.85
USP11P51784 SNORA20B-201ENST00000384220 132 ntBASIC3.51□□□□□ -1.85
USP11P51784 RNU6-1077P-201ENST00000410506 102 ntBASIC3.51□□□□□ -1.85
USP11P51784 Y_RNA.630-201ENST00000411370 108 ntBASIC3.51□□□□□ -1.85
USP11P51784 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.51□□□□□ -1.85
USP11P51784 AL121890.1-201ENST00000435457 205 ntBASIC3.51□□□□□ -1.85
USP11P51784 SNORA59A-201ENST00000459326 152 ntBASIC3.51□□□□□ -1.85
USP11P51784 RNU5E-3P-201ENST00000515913 68 ntBASIC3.51□□□□□ -1.85
USP11P51784 SNORA31.1-201ENST00000515993 133 ntBASIC3.51□□□□□ -1.85
USP11P51784 SNORA31.5-201ENST00000516190 133 ntBASIC3.51□□□□□ -1.85
USP11P51784 RNU6-711P-201ENST00000517255 106 ntBASIC3.51□□□□□ -1.85
USP11P51784 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.51□□□□□ -1.85
USP11P51784 AC107294.3-201ENST00000609211 526 ntBASIC3.51□□□□□ -1.85
USP11P51784 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.51□□□□□ -1.85
USP11P51784 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.51□□□□□ -1.85
USP11P51784 AC103988.1-201ENST00000566382 2177 ntBASIC3.51□□□□□ -1.85
USP11P51784 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.5□□□□□ -1.85
USP11P51784 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP11P51784 RNU6-1323P-201ENST00000384025 107 ntBASIC3.5□□□□□ -1.85
USP11P51784 MIR518C-201ENST00000384822 101 ntBASIC3.5□□□□□ -1.85
USP11P51784 MIR147B-201ENST00000390185 80 ntBASIC3.5□□□□□ -1.85
USP11P51784 MIR873-201ENST00000401120 77 ntBASIC3.5□□□□□ -1.85
USP11P51784 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.5□□□□□ -1.85
USP11P51784 AL357134.1-201ENST00000445848 426 ntBASIC3.5□□□□□ -1.85
USP11P51784 AC112771.1-201ENST00000463581 102 ntBASIC3.5□□□□□ -1.85
USP11P51784 HMGN2P9-201ENST00000476875 229 ntBASIC3.5□□□□□ -1.85
USP11P51784 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.5□□□□□ -1.85
USP11P51784 AC008885.1-201ENST00000514930 301 ntBASIC3.5□□□□□ -1.85
USP11P51784 RNU6-1098P-201ENST00000516772 96 ntBASIC3.5□□□□□ -1.85
USP11P51784 AC093732.2-201ENST00000607950 274 ntBASIC3.5□□□□□ -1.85
USP11P51784 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms