Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL050343.2-201ENST00000607338 280 ntBASIC1.03□□□□□ -2.24
CX3CR1P49238 AC005014.2-201ENST00000607795 599 ntBASIC1.03□□□□□ -2.24
CX3CR1P49238 AC002553.4-201ENST00000616896 331 ntBASIC1.03□□□□□ -2.24
CX3CR1P49238 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.03□□□□□ -2.24
CX3CR1P49238 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
CX3CR1P49238 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CX3CR1P49238 Y_RNA.339-201ENST00000365325 102 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 RNA5SP323-201ENST00000391094 133 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 MIR548K-201ENST00000408406 116 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 MIR1277-201ENST00000408536 78 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 RPL37P10-201ENST00000412884 288 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.02□□□□□ -2.25
CX3CR1P49238 RPS29P28-201ENST00000446439 141 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 U8.22-201ENST00000459141 133 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 Y_RNA.670-201ENST00000516255 105 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 SUMO2P16-201ENST00000519475 264 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AL590705.4-201ENST00000532209 134 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 MIR5701-3-201ENST00000578890 82 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 MIR5701-1-201ENST00000585138 82 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AC125232.2-201ENST00000592457 143 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AL929325.1-201ENST00000603096 117 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AL390123.1-201ENST00000603216 237 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AC018462.2-201ENST00000605375 395 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AL357075.2-201ENST00000614906 189 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AL157834.3-201ENST00000615543 103 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 MIR5701-2-201ENST00000615634 82 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 AL353770.2-201ENST00000620024 78 ntBASIC1.02□□□□□ -2.25
CX3CR1P49238 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.02□□□□□ -2.25
CX3CR1P49238 ZNF299P-201ENST00000406845 1804 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 Y_RNA.6-201ENST00000362350 114 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 Y_RNA.106-201ENST00000363189 100 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 MIR548F5-201ENST00000408421 86 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 PGBD4P5-201ENST00000445958 426 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 AC074290.1-201ENST00000448883 135 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.01□□□□□ -2.25
CX3CR1P49238 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.01□□□□□ -2.25
CX3CR1P49238 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.01□□□□□ -2.25
CX3CR1P49238 AC103851.1-201ENST00000506833 274 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.01□□□□□ -2.25
CX3CR1P49238 MIR5695-201ENST00000579717 85 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 MIR4273-201ENST00000582824 84 ntBASIC1.01□□□□□ -2.25
CX3CR1P49238 RNU6-1123P-201ENST00000362347 106 ntBASIC1□□□□□ -2.25
CX3CR1P49238 U3.8-201ENST00000363675 217 ntBASIC1□□□□□ -2.25
CX3CR1P49238 RNA5SP99-201ENST00000364020 114 ntBASIC1□□□□□ -2.25
CX3CR1P49238 RNU6-1240P-201ENST00000365155 104 ntBASIC1□□□□□ -2.25
CX3CR1P49238 Y_RNA.404-201ENST00000383978 102 ntBASIC1□□□□□ -2.25
CX3CR1P49238 RNU6-281P-201ENST00000384212 103 ntBASIC1□□□□□ -2.25
CX3CR1P49238 RNU6-793P-201ENST00000384233 104 ntBASIC1□□□□□ -2.25
CX3CR1P49238 RNU6-541P-201ENST00000384709 110 ntBASIC1□□□□□ -2.25
CX3CR1P49238 Y_RNA.573-201ENST00000384763 105 ntBASIC1□□□□□ -2.25
CX3CR1P49238 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1□□□□□ -2.25
CX3CR1P49238 Y_RNA.594-201ENST00000410373 140 ntBASIC1□□□□□ -2.25
CX3CR1P49238 RNU6-1001P-201ENST00000411265 100 ntBASIC1□□□□□ -2.25
CX3CR1P49238 AC009161.1-201ENST00000417306 376 ntBASIC1□□□□□ -2.25
CX3CR1P49238 MTND4LP16-201ENST00000440828 295 ntBASIC1□□□□□ -2.25
CX3CR1P49238 MTND4P18-201ENST00000447010 465 ntBASIC1□□□□□ -2.25
CX3CR1P49238 AC093303.1-201ENST00000514549 295 ntBASIC1□□□□□ -2.25
CX3CR1P49238 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
CX3CR1P49238 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1□□□□□ -2.25
CX3CR1P49238 AC024995.1-201ENST00000523014 93 ntBASIC1□□□□□ -2.25
CX3CR1P49238 AC134698.4-201ENST00000523451 826 ntBASIC1□□□□□ -2.25
CX3CR1P49238 AF235103.2-201ENST00000525753 346 ntBASIC1□□□□□ -2.25
CX3CR1P49238 AC068790.6-201ENST00000602558 258 ntBASIC1□□□□□ -2.25
CX3CR1P49238 AC021506.2-201ENST00000612354 169 ntBASIC1□□□□□ -2.25
CX3CR1P49238 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
CX3CR1P49238 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CX3CR1P49238 MTND5P16-201ENST00000460269 1703 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 RNU6-137P-201ENST00000363680 108 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 Y_RNA.184-201ENST00000363884 108 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 RNU1-139P-201ENST00000391307 165 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 MIR320B2-201ENST00000408479 138 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 RNU4-14P-201ENST00000410858 122 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 MTND3P8-201ENST00000412909 339 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 RPS3AP52-201ENST00000435639 297 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.99□□□□□ -2.25
CX3CR1P49238 SNORD65B-201ENST00000459126 73 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 RPL7P42-201ENST00000481005 679 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 RNU7-175P-201ENST00000515915 61 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 RNU1-54P-201ENST00000517181 120 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 AP002001.1-203ENST00000534002 267 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 AC060780.3-201ENST00000589464 80 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.99□□□□□ -2.25
CX3CR1P49238 U6.73-201ENST00000619194 103 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 AC068647.2-201ENST00000637380 353 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 AC068137.4-201ENST00000638485 296 ntBASIC0.99□□□□□ -2.25
CX3CR1P49238 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CX3CR1P49238 RNA5SP361-201ENST00000362686 118 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 Y_RNA.179-201ENST00000363844 90 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 RNU6-1013P-201ENST00000384180 107 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 ELOCP21-201ENST00000412558 336 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 EIF1P2-201ENST00000428233 350 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 AL353997.1-201ENST00000432936 108 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.98□□□□□ -2.25
CX3CR1P49238 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.98□□□□□ -2.25
CX3CR1P49238 NDUFB4P10-201ENST00000452541 359 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 AC093852.1-201ENST00000503587 266 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.98□□□□□ -2.25
CX3CR1P49238 RNU6-120P-201ENST00000516077 103 ntBASIC0.98□□□□□ -2.25
CX3CR1P49238 RNU6-358P-201ENST00000516564 75 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms