Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SOX2P48431 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SOX2P48431 MIR208A-201ENST00000362287 71 ntBASIC2.24□□□□□ -2.05
SOX2P48431 RNU4-80P-201ENST00000363200 141 ntBASIC2.24□□□□□ -2.05
SOX2P48431 Y_RNA.277-201ENST00000364754 102 ntBASIC2.24□□□□□ -2.05
SOX2P48431 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.24□□□□□ -2.05
SOX2P48431 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
SOX2P48431 MTCO1P44-201ENST00000441935 243 ntBASIC2.24□□□□□ -2.05
SOX2P48431 AC091959.1-201ENST00000495857 238 ntBASIC2.24□□□□□ -2.05
SOX2P48431 HMGB3P3-201ENST00000510526 400 ntBASIC2.24□□□□□ -2.05
SOX2P48431 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.24□□□□□ -2.05
SOX2P48431 SNORA4.4-201ENST00000515921 135 ntBASIC2.24□□□□□ -2.05
SOX2P48431 SNORA70.12-201ENST00000516084 153 ntBASIC2.24□□□□□ -2.05
SOX2P48431 RNU6-794P-201ENST00000517261 64 ntBASIC2.24□□□□□ -2.05
SOX2P48431 MIR5195-201ENST00000583555 115 ntBASIC2.24□□□□□ -2.05
SOX2P48431 AC005828.6-201ENST00000606610 232 ntBASIC2.24□□□□□ -2.05
SOX2P48431 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.24□□□□□ -2.05
SOX2P48431 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.24□□□□□ -2.05
SOX2P48431 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SOX2P48431 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.23□□□□□ -2.05
SOX2P48431 SNORA38-201ENST00000363946 132 ntBASIC2.23□□□□□ -2.05
SOX2P48431 Y_RNA.257-201ENST00000364596 102 ntBASIC2.23□□□□□ -2.05
SOX2P48431 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.23□□□□□ -2.05
SOX2P48431 RNU6-710P-201ENST00000410424 105 ntBASIC2.23□□□□□ -2.05
SOX2P48431 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.23□□□□□ -2.05
SOX2P48431 AL135938.1-201ENST00000443141 297 ntBASIC2.23□□□□□ -2.05
SOX2P48431 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.23□□□□□ -2.05
SOX2P48431 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.23□□□□□ -2.05
SOX2P48431 RNU6-191P-201ENST00000516295 94 ntBASIC2.23□□□□□ -2.05
SOX2P48431 SNORA27.4-201ENST00000516650 95 ntBASIC2.23□□□□□ -2.05
SOX2P48431 AC025647.1-201ENST00000517879 253 ntBASIC2.23□□□□□ -2.05
SOX2P48431 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.23□□□□□ -2.05
SOX2P48431 RPL21P9-201ENST00000556149 474 ntBASIC2.23□□□□□ -2.05
SOX2P48431 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.23□□□□□ -2.05
SOX2P48431 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.23□□□□□ -2.05
SOX2P48431 AC141273.2-201ENST00000618989 130 ntBASIC2.23□□□□□ -2.05
SOX2P48431 AC078938.1-201ENST00000620993 318 ntBASIC2.23□□□□□ -2.05
SOX2P48431 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.23□□□□□ -2.05
SOX2P48431 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.22□□□□□ -2.05
SOX2P48431 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
SOX2P48431 UBE2WP1-201ENST00000362030 340 ntBASIC2.22□□□□□ -2.05
SOX2P48431 Y_RNA.99-201ENST00000363138 105 ntBASIC2.22□□□□□ -2.05
SOX2P48431 Y_RNA.275-201ENST00000364726 110 ntBASIC2.22□□□□□ -2.05
SOX2P48431 RNU6-1240P-201ENST00000365155 104 ntBASIC2.22□□□□□ -2.05
SOX2P48431 Y_RNA.515-201ENST00000384535 112 ntBASIC2.22□□□□□ -2.05
SOX2P48431 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.22□□□□□ -2.05
SOX2P48431 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.22□□□□□ -2.05
SOX2P48431 EDDM3CP-201ENST00000415977 425 ntBASIC2.22□□□□□ -2.05
SOX2P48431 RPS12P2-201ENST00000439728 269 ntBASIC2.22□□□□□ -2.05
SOX2P48431 AL139109.1-201ENST00000455491 297 ntBASIC2.22□□□□□ -2.05
SOX2P48431 AC010598.1-201ENST00000510378 103 ntBASIC2.22□□□□□ -2.05
SOX2P48431 RNA5SP282-201ENST00000516355 108 ntBASIC2.22□□□□□ -2.05
SOX2P48431 RNU6-111P-201ENST00000517179 105 ntBASIC2.22□□□□□ -2.05
SOX2P48431 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.22□□□□□ -2.05
SOX2P48431 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.22□□□□□ -2.05
SOX2P48431 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.22□□□□□ -2.05
SOX2P48431 SNORD114-7-201ENST00000362520 77 ntBASIC2.21□□□□□ -2.06
SOX2P48431 Y_RNA.65-201ENST00000362846 100 ntBASIC2.21□□□□□ -2.06
SOX2P48431 RNU6-271P-201ENST00000363858 105 ntBASIC2.21□□□□□ -2.06
SOX2P48431 RNU6-740P-201ENST00000364734 105 ntBASIC2.21□□□□□ -2.06
SOX2P48431 Y_RNA.361-201ENST00000365515 120 ntBASIC2.21□□□□□ -2.06
SOX2P48431 Y_RNA.539-201ENST00000384635 107 ntBASIC2.21□□□□□ -2.06
SOX2P48431 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.21□□□□□ -2.06
SOX2P48431 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.21□□□□□ -2.06
SOX2P48431 SNORD65B-201ENST00000459126 73 ntBASIC2.21□□□□□ -2.06
SOX2P48431 RNU6-856P-201ENST00000516959 98 ntBASIC2.21□□□□□ -2.06
SOX2P48431 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.21□□□□□ -2.06
SOX2P48431 AC026271.5-201ENST00000577873 130 ntBASIC2.21□□□□□ -2.06
SOX2P48431 MIR3668-201ENST00000582138 75 ntBASIC2.21□□□□□ -2.06
SOX2P48431 MIR4325-201ENST00000583049 90 ntBASIC2.21□□□□□ -2.06
SOX2P48431 AL162424.1-201ENST00000602325 221 ntBASIC2.21□□□□□ -2.06
SOX2P48431 AL137847.3-201ENST00000611521 109 ntBASIC2.21□□□□□ -2.06
SOX2P48431 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SOX2P48431 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SOX2P48431 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SOX2P48431 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX2P48431 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX2P48431 RNU6-338P-201ENST00000383888 105 ntBASIC2.2□□□□□ -2.06
SOX2P48431 SNORA20B-201ENST00000384220 132 ntBASIC2.2□□□□□ -2.06
SOX2P48431 MIR873-201ENST00000401120 77 ntBASIC2.2□□□□□ -2.06
SOX2P48431 AL355796.1-201ENST00000406706 323 ntBASIC2.2□□□□□ -2.06
SOX2P48431 Z92545.1-201ENST00000411782 234 ntBASIC2.2□□□□□ -2.06
SOX2P48431 AC245102.2-201ENST00000448956 180 ntBASIC2.2□□□□□ -2.06
SOX2P48431 RNU4-71P-201ENST00000516258 113 ntBASIC2.2□□□□□ -2.06
SOX2P48431 AC087441.2-201ENST00000529141 262 ntBASIC2.2□□□□□ -2.06
SOX2P48431 CYCSP26-201ENST00000534107 320 ntBASIC2.2□□□□□ -2.06
SOX2P48431 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.2□□□□□ -2.06
SOX2P48431 AC006435.5-201ENST00000624486 112 ntBASIC2.2□□□□□ -2.06
SOX2P48431 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SOX2P48431 MIR340-201ENST00000362125 95 ntBASIC2.19□□□□□ -2.06
SOX2P48431 RNU1-91P-201ENST00000364746 163 ntBASIC2.19□□□□□ -2.06
SOX2P48431 RNU1-51P-201ENST00000365345 176 ntBASIC2.19□□□□□ -2.06
SOX2P48431 SNORA9-201ENST00000384215 133 ntBASIC2.19□□□□□ -2.06
SOX2P48431 RNU6-662P-201ENST00000384253 104 ntBASIC2.19□□□□□ -2.06
SOX2P48431 SNORA44-201ENST00000384584 132 ntBASIC2.19□□□□□ -2.06
SOX2P48431 SNORD58.1-201ENST00000391313 66 ntBASIC2.19□□□□□ -2.06
SOX2P48431 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.19□□□□□ -2.06
SOX2P48431 SNORA11.2-201ENST00000408318 127 ntBASIC2.19□□□□□ -2.06
SOX2P48431 Y_RNA.590-201ENST00000410140 107 ntBASIC2.19□□□□□ -2.06
SOX2P48431 RNU2-61P-201ENST00000411069 191 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms