Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC009310.1-201ENST00000414414 451 ntBASIC1.93□□□□□ -2.1
MTHFRP42898 AP1B1P2-201ENST00000416196 106 ntBASIC1.93□□□□□ -2.1
MTHFRP42898 SNORA25.14-201ENST00000516481 132 ntBASIC1.93□□□□□ -2.1
MTHFRP42898 RNU6-1198P-201ENST00000516904 67 ntBASIC1.93□□□□□ -2.1
MTHFRP42898 Y_RNA.706-201ENST00000516933 99 ntBASIC1.93□□□□□ -2.1
MTHFRP42898 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.93□□□□□ -2.1
MTHFRP42898 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.93□□□□□ -2.1
MTHFRP42898 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
MTHFRP42898 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
MTHFRP42898 RNU6-490P-201ENST00000362985 107 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 Y_RNA.148-201ENST00000363557 117 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 Y_RNA.269-201ENST00000364685 89 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 RNU6-245P-201ENST00000384020 107 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 Y_RNA.445-201ENST00000384168 102 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 MIR499A-201ENST00000384903 122 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 RNU6-159P-201ENST00000391080 106 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 RNU4-62P-201ENST00000410125 130 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 RNU2-20P-201ENST00000410425 191 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MTHFRP42898 RPL23AP50-201ENST00000434149 455 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 AC016717.1-201ENST00000448918 286 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.92□□□□□ -2.1
MTHFRP42898 RNU1-131P-201ENST00000458943 161 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 HMGN2P9-201ENST00000476875 229 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 RPL17P19-201ENST00000489069 552 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 AC005840.1-201ENST00000498412 377 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 RNU6-307P-201ENST00000516743 106 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 AP003072.1-201ENST00000531740 145 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 AC100812.1-201ENST00000607622 580 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 MIR8070-201ENST00000616510 88 ntBASIC1.92□□□□□ -2.1
MTHFRP42898 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
MTHFRP42898 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
MTHFRP42898 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
MTHFRP42898 Y_RNA.106-201ENST00000363189 100 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 RNU6-99P-201ENST00000364721 107 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 RNY1P14-201ENST00000384426 108 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.91□□□□□ -2.1
MTHFRP42898 CHEK2P4-201ENST00000450340 246 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 RNA5SP57-201ENST00000459463 123 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 AC105758.1-201ENST00000506038 399 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
MTHFRP42898 RNVU1-2-201ENST00000516326 135 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 SCARNA15.1-201ENST00000516384 125 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 MIR4255-201ENST00000579351 72 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 MIR5695-201ENST00000579717 85 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
MTHFRP42898 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.91□□□□□ -2.1
MTHFRP42898 MIR502-201ENST00000606349 86 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.91□□□□□ -2.1
MTHFRP42898 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 AC083806.3-201ENST00000614016 455 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 AC138305.3-201ENST00000624988 240 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
MTHFRP42898 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
MTHFRP42898 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
MTHFRP42898 AL159152.1-201ENST00000635019 2587 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 RNU6-727P-201ENST00000363592 107 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 RNU6-137P-201ENST00000363680 108 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 SNORA22B-201ENST00000383876 138 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 MIR10B-201ENST00000385011 110 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 RNU6-700P-201ENST00000391043 107 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 USP9YP16-201ENST00000430287 407 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 MTND4P19-201ENST00000446659 478 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 USP9YP23-201ENST00000455085 407 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.9□□□□□ -2.11
MTHFRP42898 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.9□□□□□ -2.11
MTHFRP42898 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.9□□□□□ -2.11
MTHFRP42898 RNU6-344P-201ENST00000516635 111 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 RN7SKP295-201ENST00000517264 153 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.9□□□□□ -2.11
MTHFRP42898 AC007485.1-201ENST00000616755 206 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
MTHFRP42898 Y_RNA.28-201ENST00000362554 111 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 SNORD87-201ENST00000364849 89 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 SNORA67.2-201ENST00000384300 149 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 Y_RNA.508-201ENST00000384502 114 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 Y_RNA.577-201ENST00000384794 101 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 MIR586-201ENST00000385035 97 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 MIR190B-201ENST00000401119 79 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 RNA5SP504-201ENST00000410676 117 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 MCFD2P1-201ENST00000417812 300 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.89□□□□□ -2.11
MTHFRP42898 AL357134.1-201ENST00000445848 426 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 AC114982.1-201ENST00000469402 321 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 AC091179.3-201ENST00000474761 144 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.89□□□□□ -2.11
MTHFRP42898 AC005786.1-201ENST00000588553 154 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 SNORD11B-201ENST00000607707 90 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 AC087588.2-201ENST00000617667 426 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 AL078596.1-201ENST00000624856 447 ntBASIC1.89□□□□□ -2.11
MTHFRP42898 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
MTHFRP42898 MTND5P16-201ENST00000460269 1703 ntBASIC1.88□□□□□ -2.11
MTHFRP42898 RNU6-280P-201ENST00000364145 104 ntBASIC1.88□□□□□ -2.11
MTHFRP42898 SNORA25.9-201ENST00000365087 128 ntBASIC1.88□□□□□ -2.11
MTHFRP42898 RNU1-115P-201ENST00000365329 160 ntBASIC1.88□□□□□ -2.11
MTHFRP42898 RNU6-975P-201ENST00000384296 105 ntBASIC1.88□□□□□ -2.11
MTHFRP42898 AC092423.1-201ENST00000430165 186 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms