Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.87□□□□□ -2.11
HADHAP40939 RPL36AP21-201ENST00000490372 323 ntBASIC1.87□□□□□ -2.11
HADHAP40939 HMGN1P13-201ENST00000505795 138 ntBASIC1.87□□□□□ -2.11
HADHAP40939 AC025465.3-201ENST00000510570 311 ntBASIC1.87□□□□□ -2.11
HADHAP40939 AL117351.2-201ENST00000513571 157 ntBASIC1.87□□□□□ -2.11
HADHAP40939 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
HADHAP40939 AL137100.2-201ENST00000555786 315 ntBASIC1.87□□□□□ -2.11
HADHAP40939 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HADHAP40939 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HADHAP40939 MIR410-201ENST00000362222 80 ntBASIC1.86□□□□□ -2.11
HADHAP40939 RNU6-490P-201ENST00000362985 107 ntBASIC1.86□□□□□ -2.11
HADHAP40939 MIR30A-201ENST00000385092 71 ntBASIC1.86□□□□□ -2.11
HADHAP40939 RNY4P36-201ENST00000391116 96 ntBASIC1.86□□□□□ -2.11
HADHAP40939 RNU6-1156P-201ENST00000410365 100 ntBASIC1.86□□□□□ -2.11
HADHAP40939 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.86□□□□□ -2.11
HADHAP40939 HSPE1P21-201ENST00000438283 308 ntBASIC1.86□□□□□ -2.11
HADHAP40939 AC099799.1-201ENST00000439809 192 ntBASIC1.86□□□□□ -2.11
HADHAP40939 RPL30P15-201ENST00000457129 321 ntBASIC1.86□□□□□ -2.11
HADHAP40939 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.86□□□□□ -2.11
HADHAP40939 AL359075.3-201ENST00000613288 217 ntBASIC1.86□□□□□ -2.11
HADHAP40939 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.86□□□□□ -2.11
HADHAP40939 AC073544.1-201ENST00000600110 1595 ntBASIC1.85□□□□□ -2.11
HADHAP40939 Y_RNA.287-201ENST00000364853 94 ntBASIC1.85□□□□□ -2.11
HADHAP40939 RNU6-417P-201ENST00000384712 107 ntBASIC1.85□□□□□ -2.11
HADHAP40939 RNU11-5P-201ENST00000391216 129 ntBASIC1.85□□□□□ -2.11
HADHAP40939 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.85□□□□□ -2.11
HADHAP40939 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.85□□□□□ -2.11
HADHAP40939 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.85□□□□□ -2.11
HADHAP40939 RNU6-107P-201ENST00000516643 102 ntBASIC1.85□□□□□ -2.11
HADHAP40939 RNU1-142P-201ENST00000516682 145 ntBASIC1.85□□□□□ -2.11
HADHAP40939 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.85□□□□□ -2.11
HADHAP40939 AC022868.1-201ENST00000517767 391 ntBASIC1.85□□□□□ -2.11
HADHAP40939 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.85□□□□□ -2.11
HADHAP40939 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
HADHAP40939 MIR1244-1-201ENST00000612829 85 ntBASIC1.85□□□□□ -2.11
HADHAP40939 MIR8074-201ENST00000615081 81 ntBASIC1.85□□□□□ -2.11
HADHAP40939 AL353997.5-201ENST00000618886 171 ntBASIC1.85□□□□□ -2.11
HADHAP40939 MIR1244-3-201ENST00000635744 85 ntBASIC1.85□□□□□ -2.11
HADHAP40939 MIR1244-2-201ENST00000636449 85 ntBASIC1.85□□□□□ -2.11
HADHAP40939 MIR1244-4-202ENST00000636813 85 ntBASIC1.85□□□□□ -2.11
HADHAP40939 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
HADHAP40939 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HADHAP40939 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
HADHAP40939 MTND5P10-201ENST00000603719 1809 ntBASIC1.84□□□□□ -2.11
HADHAP40939 RNU6-414P-201ENST00000363705 104 ntBASIC1.84□□□□□ -2.11
HADHAP40939 RNU6-950P-201ENST00000384651 107 ntBASIC1.84□□□□□ -2.11
HADHAP40939 MTND4P28-201ENST00000426217 387 ntBASIC1.84□□□□□ -2.11
HADHAP40939 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.84□□□□□ -2.11
HADHAP40939 AC236972.2-201ENST00000434979 310 ntBASIC1.84□□□□□ -2.11
HADHAP40939 SUMO1P2-201ENST00000452524 304 ntBASIC1.84□□□□□ -2.11
HADHAP40939 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
HADHAP40939 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.84□□□□□ -2.11
HADHAP40939 RNU6-911P-201ENST00000516523 104 ntBASIC1.84□□□□□ -2.11
HADHAP40939 Y_RNA.718-201ENST00000517110 102 ntBASIC1.84□□□□□ -2.11
HADHAP40939 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.84□□□□□ -2.11
HADHAP40939 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.84□□□□□ -2.11
HADHAP40939 MT-TD-201ENST00000387419 68 ntBASIC1.83□□□□□ -2.12
HADHAP40939 RNA5SP323-201ENST00000391094 133 ntBASIC1.83□□□□□ -2.12
HADHAP40939 Y_RNA.592-201ENST00000410274 109 ntBASIC1.83□□□□□ -2.12
HADHAP40939 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.83□□□□□ -2.12
HADHAP40939 MTCO3P10-201ENST00000455912 772 ntBASIC1.83□□□□□ -2.12
HADHAP40939 RNU7-152P-201ENST00000458982 64 ntBASIC1.83□□□□□ -2.12
HADHAP40939 AC010598.1-201ENST00000510378 103 ntBASIC1.83□□□□□ -2.12
HADHAP40939 AC110588.1-201ENST00000559699 137 ntBASIC1.83□□□□□ -2.12
HADHAP40939 AL355375.2-201ENST00000574825 175 ntBASIC1.83□□□□□ -2.12
HADHAP40939 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
HADHAP40939 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
HADHAP40939 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.83□□□□□ -2.12
HADHAP40939 MIR6845-201ENST00000613182 61 ntBASIC1.83□□□□□ -2.12
HADHAP40939 RNU6-1310P-201ENST00000384153 107 ntBASIC1.82□□□□□ -2.12
HADHAP40939 RNY3P14-201ENST00000384309 102 ntBASIC1.82□□□□□ -2.12
HADHAP40939 Y_RNA.498-201ENST00000384460 102 ntBASIC1.82□□□□□ -2.12
HADHAP40939 SNORD116-29-201ENST00000384516 83 ntBASIC1.82□□□□□ -2.12
HADHAP40939 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HADHAP40939 ELOCP21-201ENST00000412558 336 ntBASIC1.82□□□□□ -2.12
HADHAP40939 HSPE1P9-201ENST00000440046 311 ntBASIC1.82□□□□□ -2.12
HADHAP40939 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
HADHAP40939 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
HADHAP40939 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.82□□□□□ -2.12
HADHAP40939 RPS26P45-201ENST00000471748 340 ntBASIC1.82□□□□□ -2.12
HADHAP40939 RPL23AP63-201ENST00000498752 471 ntBASIC1.82□□□□□ -2.12
HADHAP40939 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.82□□□□□ -2.12
HADHAP40939 AC018448.1-201ENST00000552843 316 ntBASIC1.82□□□□□ -2.12
HADHAP40939 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
HADHAP40939 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
HADHAP40939 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HADHAP40939 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.82□□□□□ -2.12
HADHAP40939 AC087588.2-201ENST00000617667 426 ntBASIC1.82□□□□□ -2.12
HADHAP40939 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HADHAP40939 RNA5SP361-201ENST00000362686 118 ntBASIC1.81□□□□□ -2.12
HADHAP40939 RNU6-1301P-201ENST00000362724 104 ntBASIC1.81□□□□□ -2.12
HADHAP40939 RNU6-1040P-201ENST00000383974 107 ntBASIC1.81□□□□□ -2.12
HADHAP40939 RNU6-318P-201ENST00000384283 103 ntBASIC1.81□□□□□ -2.12
HADHAP40939 U8.22-201ENST00000459141 133 ntBASIC1.81□□□□□ -2.12
HADHAP40939 RPL26P26-201ENST00000480251 434 ntBASIC1.81□□□□□ -2.12
HADHAP40939 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.81□□□□□ -2.12
HADHAP40939 U6.73-201ENST00000619194 103 ntBASIC1.81□□□□□ -2.12
HADHAP40939 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HADHAP40939 Y_RNA.187-201ENST00000363918 113 ntBASIC1.8□□□□□ -2.12
HADHAP40939 RNY3P4-201ENST00000384428 101 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms