Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.53□□□□□ -2.16
HMGCLP35914 CYP2C61P-201ENST00000604072 290 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 U1.36-201ENST00000620684 176 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 AC130454.1-201ENST00000622948 401 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 AL078596.1-201ENST00000624856 447 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 snoZ196.1-201ENST00000625269 89 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 Y_RNA.5-201ENST00000362334 102 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU6-1301P-201ENST00000362724 104 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.67-201ENST00000362870 100 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU6-1305P-201ENST00000364353 104 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.252-201ENST00000364556 101 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU5E-4P-201ENST00000364931 120 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.315-201ENST00000365117 102 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.415-201ENST00000384012 112 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNA5SP100-201ENST00000410903 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNA5SP59-201ENST00000410922 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU6-1001P-201ENST00000411265 100 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MRPS18CP6-201ENST00000423587 223 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU1-98P-201ENST00000458992 160 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU7-57P-201ENST00000459540 60 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 RNU7-4P-201ENST00000516961 62 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AC025647.1-201ENST00000517879 253 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGCLP35914 MIR5695-201ENST00000579717 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR4795-201ENST00000584182 89 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AL133255.1-201ENST00000606374 441 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR1244-1-201ENST00000612829 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AL357075.2-201ENST00000614906 189 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 Y_RNA.804-201ENST00000615262 101 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR1244-3-201ENST00000635744 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR338-201ENST00000636369 67 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR1244-2-201ENST00000636449 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MIR1244-4-202ENST00000636813 85 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
HMGCLP35914 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 AL159152.1-201ENST00000635019 2587 ntBASIC1.52□□□□□ -2.17
HMGCLP35914 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGCLP35914 SNORD115-3-201ENST00000363100 82 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 Y_RNA.112-201ENST00000363250 102 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 Y_RNA.358-201ENST00000365491 99 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 SNORD42.2-201ENST00000365570 69 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 Y_RNA.496-201ENST00000384444 101 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 MIR625-201ENST00000385047 85 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 MTND4P28-201ENST00000426217 387 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCLP35914 AC236972.2-201ENST00000434979 310 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 AC099799.1-201ENST00000439809 192 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 AC016717.1-201ENST00000448918 286 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 Y_RNA.639-201ENST00000458981 102 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 AC011406.1-201ENST00000512440 370 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGCLP35914 SNORA44.1-201ENST00000517031 108 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 RNU6-264P-201ENST00000517134 104 ntBASIC1.51□□□□□ -2.17
HMGCLP35914 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGCLP35914 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMGCLP35914 RNA5SP361-201ENST00000362686 118 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 Y_RNA.58-201ENST00000362807 102 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 Y_RNA.154-201ENST00000363624 102 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 SNORD87-201ENST00000364849 89 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNY3P1-201ENST00000365085 102 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNU1-115P-201ENST00000365329 160 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNY3-201ENST00000365484 102 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNY3P4-201ENST00000384428 101 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNU6-296P-201ENST00000384608 107 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC092423.1-201ENST00000430165 186 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AL445305.1-201ENST00000432577 575 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCLP35914 AL137792.2-201ENST00000443484 235 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC074290.1-201ENST00000448883 135 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 CHEK2P4-201ENST00000450340 246 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCLP35914 ATP5J2P3-201ENST00000451550 258 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 MIR2053-201ENST00000459295 91 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 RNU6-699P-201ENST00000517081 110 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AL442163.3-201ENST00000554110 156 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC005828.6-201ENST00000606610 232 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC104985.2-201ENST00000620598 500 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.5□□□□□ -2.17
HMGCLP35914 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCLP35914 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 Y_RNA.197-201ENST00000364004 102 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 Y_RNA.361-201ENST00000365515 120 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 RNU6-1264P-201ENST00000383891 107 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 SNORA69.1-201ENST00000390904 137 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 RN7SKP51-201ENST00000410781 304 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCLP35914 CST2P1-201ENST00000425770 87 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 TOMM22P2-201ENST00000430735 237 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AC245047.4-201ENST00000433189 144 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 HMGN2P34-201ENST00000437647 269 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms