Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RN7SKP49-201ENST00000516675 260 ntBASIC1.79□□□□□ -2.12
HOXD13P35453 RNU7-4P-201ENST00000516961 62 ntBASIC1.79□□□□□ -2.12
HOXD13P35453 RNU6-1213P-201ENST00000517075 94 ntBASIC1.79□□□□□ -2.12
HOXD13P35453 MIR4709-201ENST00000577272 72 ntBASIC1.79□□□□□ -2.12
HOXD13P35453 AC125232.2-201ENST00000592457 143 ntBASIC1.79□□□□□ -2.12
HOXD13P35453 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXD13P35453 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXD13P35453 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXD13P35453 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.78□□□□□ -2.12
HOXD13P35453 RNU6-99P-201ENST00000364721 107 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 RNU4-14P-201ENST00000410858 122 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 Y_RNA.653-201ENST00000459091 95 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 AL163195.1-201ENST00000496941 348 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 AC010598.1-201ENST00000510378 103 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 AC144568.1-201ENST00000520139 137 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 SUB1P3-201ENST00000564581 315 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 MIR4285-201ENST00000581001 85 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 AC005730.3-201ENST00000583067 366 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 AC016925.2-201ENST00000605108 242 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 AC080078.3-201ENST00000605407 463 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 MIR1244-1-201ENST00000612829 85 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 AL359757.2-201ENST00000624309 274 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 MIR1244-3-201ENST00000635744 85 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 MIR1244-2-201ENST00000636449 85 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 MIR1244-4-202ENST00000636813 85 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 AC100821.1-201ENST00000523153 2479 ntBASIC1.78□□□□□ -2.12
HOXD13P35453 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HOXD13P35453 RNU6-874P-201ENST00000362390 105 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 Y_RNA.67-201ENST00000362870 100 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 Y_RNA.387-201ENST00000383918 102 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 RNU6-310P-201ENST00000384655 107 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 SNORA69.1-201ENST00000390904 137 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 RNU6-1186P-201ENST00000410429 97 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 Y_RNA.646-201ENST00000410980 101 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 RNU7-94P-201ENST00000459576 63 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 RNU7-99P-201ENST00000516271 62 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.77□□□□□ -2.13
HOXD13P35453 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.77□□□□□ -2.13
HOXD13P35453 MIR4422-201ENST00000581938 83 ntBASIC1.77□□□□□ -2.13
HOXD13P35453 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.77□□□□□ -2.13
HOXD13P35453 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HOXD13P35453 SNORD33-201ENST00000362761 85 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 SNORA72.1-201ENST00000363485 129 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 SNORA33-201ENST00000363664 130 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 RNU6-1283P-201ENST00000365314 105 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 RN7SKP101-201ENST00000411376 320 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 RPS20P15-201ENST00000412792 311 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 HSPE1P24-201ENST00000450782 238 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 RPL30P15-201ENST00000457129 321 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 SNORD65B-201ENST00000459126 73 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 AC022493.2-201ENST00000506122 481 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXD13P35453 DEFB122-202ENST00000569013 197 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 U6.73-201ENST00000619194 103 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 AC073544.1-201ENST00000600110 1595 ntBASIC1.76□□□□□ -2.13
HOXD13P35453 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
HOXD13P35453 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 WWP1P1-201ENST00000466609 2769 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 ICE2P2-201ENST00000483823 2787 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 RNU6-338P-201ENST00000383888 105 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 Y_RNA.390-201ENST00000383932 102 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 Y_RNA.474-201ENST00000384341 102 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 RNU6-1156P-201ENST00000410365 100 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 RNA5SP475-201ENST00000410568 110 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXD13P35453 AL591806.2-201ENST00000433122 173 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 RNU7-34P-201ENST00000459394 64 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 RPS27P22-201ENST00000478056 241 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXD13P35453 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXD13P35453 RNU6-470P-201ENST00000515954 104 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 SNORA25.15-201ENST00000516487 89 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 AC018448.1-201ENST00000552843 316 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 MIR4438-201ENST00000585271 93 ntBASIC1.75□□□□□ -2.13
HOXD13P35453 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXD13P35453 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXD13P35453 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HOXD13P35453 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HOXD13P35453 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 RNA5SP361-201ENST00000362686 118 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 Y_RNA.259-201ENST00000364619 101 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 RNU6-1310P-201ENST00000384153 107 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 AC093019.1-201ENST00000443135 252 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 RNU6-625P-201ENST00000459412 107 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 AC005908.1-201ENST00000468701 347 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HOXD13P35453 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXD13P35453 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.74□□□□□ -2.13
HOXD13P35453 FRG2DP-202ENST00000566967 323 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 SNORA77B-201ENST00000578179 125 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
HOXD13P35453 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
HOXD13P35453 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 RNU6-890P-201ENST00000384121 107 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 RNU1-78P-201ENST00000391248 165 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 ELOCP21-201ENST00000412558 336 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms