Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
COL8A1P27658 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
COL8A1P27658 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.45□□□□□ -1.86
COL8A1P27658 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
COL8A1P27658 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.45□□□□□ -1.86
COL8A1P27658 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.45□□□□□ -1.86
COL8A1P27658 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.45□□□□□ -1.86
COL8A1P27658 RNU1-15P-201ENST00000353977 144 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 SNORA60-201ENST00000362396 134 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 SNORD35B-201ENST00000363660 87 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 RNU6-60P-201ENST00000364792 103 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 RNA5SP97-201ENST00000365006 84 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 SNORA2.2-201ENST00000365473 135 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 RNU6-652P-201ENST00000365488 107 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 MIR577-201ENST00000385196 96 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 Y_RNA.620-201ENST00000411009 88 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 AC004552.1-201ENST00000419089 348 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 RNU7-14P-201ENST00000459331 62 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 RPS26P3-201ENST00000470205 348 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 AC090543.2-201ENST00000483963 348 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 AC004057.1-201ENST00000485827 348 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 RPL32P34-201ENST00000486380 400 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 AC113410.1-201ENST00000505029 247 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.45□□□□□ -1.86
COL8A1P27658 RN7SKP18-201ENST00000516005 275 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 CYP4A43P-201ENST00000568156 121 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 AC008739.2-201ENST00000597006 317 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 MIR432-201ENST00000606207 94 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 RNU1-30P-201ENST00000606575 163 ntBASIC3.45□□□□□ -1.86
COL8A1P27658 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.45□□□□□ -1.86
COL8A1P27658 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL8A1P27658 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
COL8A1P27658 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL8A1P27658 AC016717.1-201ENST00000448918 286 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.44□□□□□ -1.86
COL8A1P27658 RPS29P21-201ENST00000496272 170 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 RNU7-172P-201ENST00000517125 64 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 MIR4668-201ENST00000582284 70 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 MIR4305-201ENST00000583252 102 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 AC008507.4-201ENST00000585464 127 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 HMGN2P15-201ENST00000585707 270 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.44□□□□□ -1.86
COL8A1P27658 AC073308.1-201ENST00000623696 305 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 AC006160.2-201ENST00000637708 154 ntBASIC3.44□□□□□ -1.86
COL8A1P27658 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
COL8A1P27658 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL8A1P27658 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
COL8A1P27658 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL8A1P27658 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.43□□□□□ -1.86
COL8A1P27658 RNA5SP51-201ENST00000364750 119 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 Y_RNA.360-201ENST00000365512 102 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 SNORA18-201ENST00000384416 132 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 MIR93-201ENST00000385024 80 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 MIR1289-1-201ENST00000408836 144 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 SNORA74C-2-201ENST00000411179 201 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 AL513477.1-202ENST00000417061 214 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 HLA-N-201ENST00000437516 135 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 AC010099.1-201ENST00000455434 375 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 RNU1-131P-201ENST00000458943 161 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 AL133162.1-201ENST00000463228 453 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 RN7SL601P-201ENST00000471221 293 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 HMGN1P7-201ENST00000491722 313 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 RPL29P14-201ENST00000495837 428 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 RNU6-948P-201ENST00000516374 107 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 RNU7-70P-201ENST00000516941 66 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.43□□□□□ -1.86
COL8A1P27658 MIR3683-201ENST00000580847 82 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 MIR4777-201ENST00000583710 86 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 MIR548Z-201ENST00000584743 97 ntBASIC3.43□□□□□ -1.86
COL8A1P27658 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL8A1P27658 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
COL8A1P27658 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
COL8A1P27658 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.43□□□□□ -1.86
COL8A1P27658 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
COL8A1P27658 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A1P27658 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A1P27658 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL8A1P27658 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A1P27658 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL8A1P27658 RNA5SP50-201ENST00000363731 107 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 RNU6-1189P-201ENST00000383958 107 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 MIR147B-201ENST00000390185 80 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 RNU2-49P-201ENST00000410666 184 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 RNU6-733P-201ENST00000410759 104 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 RN7SL429P-201ENST00000479090 223 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 RN7SL489P-201ENST00000486185 223 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 RN7SL327P-201ENST00000488659 223 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 Y_RNA.705-201ENST00000516862 110 ntBASIC3.42□□□□□ -1.86
COL8A1P27658 RNU6-1231P-201ENST00000517185 103 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms