Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 DNAJC19P2-201ENST00000593340 302 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AL353997.5-201ENST00000618886 171 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AC068205.3-201ENST00000636385 468 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AL359854.1-201ENST00000614203 1594 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AC091152.2-201ENST00000591628 2569 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AC010889.1-201ENST00000566193 2666 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
POLR2AP24928 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
POLR2AP24928 Y_RNA.441-201ENST00000384123 112 ntBASIC2.71□□□□□ -1.98
POLR2AP24928 Y_RNA.456-201ENST00000384232 111 ntBASIC2.71□□□□□ -1.98
POLR2AP24928 RNU6-710P-201ENST00000410424 105 ntBASIC2.71□□□□□ -1.98
POLR2AP24928 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.71□□□□□ -1.98
POLR2AP24928 AL162725.1-201ENST00000435405 301 ntBASIC2.71□□□□□ -1.98
POLR2AP24928 AC004467.1-201ENST00000615678 330 ntBASIC2.71□□□□□ -1.98
POLR2AP24928 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
POLR2AP24928 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
POLR2AP24928 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
POLR2AP24928 RNU6-103P-201ENST00000363686 107 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 Y_RNA.286-201ENST00000364813 102 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 Y_RNA.497-201ENST00000384447 98 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 RNU6-843P-201ENST00000384454 104 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 AC096649.2-201ENST00000416186 393 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 RPL23AP58-201ENST00000440453 469 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.7□□□□□ -1.98
POLR2AP24928 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.7□□□□□ -1.98
POLR2AP24928 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.7□□□□□ -1.98
POLR2AP24928 AL031274.2-201ENST00000599419 203 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
POLR2AP24928 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR2AP24928 RNU6-600P-201ENST00000362524 99 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 RNU6-799P-201ENST00000363567 107 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 RNU6-1325P-201ENST00000364905 105 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 MIR549A-201ENST00000385268 96 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 RPL23AP42-201ENST00000471152 471 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.7□□□□□ -1.98
POLR2AP24928 AC025281.1-201ENST00000567026 265 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR2AP24928 AC104465.1-201ENST00000611365 139 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 MIR7111-201ENST00000619751 72 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR2AP24928 AP001486.2-201ENST00000561652 5113 ntBASIC2.7□□□□□ -1.98
POLR2AP24928 RNU6-793P-201ENST00000384233 104 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 AC004866.1-201ENST00000411748 78 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 RPL30P13-201ENST00000418873 348 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 MICF-203ENST00000432679 129 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 RPS15AP5-201ENST00000436276 388 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 AL441985.1-201ENST00000457727 251 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 AC115990.1-201ENST00000526957 301 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR2AP24928 XIST_intron.1-201ENST00000619444 68 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 snoU18.1-201ENST00000629629 71 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.69□□□□□ -1.98
POLR2AP24928 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR2AP24928 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2AP24928 RNU1-17P-201ENST00000363022 152 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 Y_RNA.164-201ENST00000363709 102 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 Y_RNA.569-201ENST00000384749 103 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 MIR1278-201ENST00000408753 81 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 RNU2-2P-201ENST00000410396 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 SNORA70.12-201ENST00000516084 153 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 RNU6-1219P-201ENST00000516143 112 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR2AP24928 RNU2-4P-201ENST00000606190 192 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.15-201ENST00000611544 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.16-201ENST00000613119 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.12-201ENST00000613778 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.9-201ENST00000615427 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.11-201ENST00000616345 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.2-201ENST00000616535 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.3-201ENST00000617785 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.19-201ENST00000618602 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 RNU2-1-201ENST00000618664 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.6-201ENST00000619225 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.5-201ENST00000619465 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 U2.10-201ENST00000620268 191 ntBASIC2.69□□□□□ -1.98
POLR2AP24928 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2AP24928 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2AP24928 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR2AP24928 SNORA22C-201ENST00000384614 134 ntBASIC2.68□□□□□ -1.98
POLR2AP24928 HMGN2P10-201ENST00000448085 265 ntBASIC2.68□□□□□ -1.98
POLR2AP24928 AC091959.1-201ENST00000495857 238 ntBASIC2.68□□□□□ -1.98
POLR2AP24928 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.68□□□□□ -1.98
POLR2AP24928 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR2AP24928 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR2AP24928 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
POLR2AP24928 RNU6-312P-201ENST00000364629 107 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 SNORA36A-201ENST00000384221 132 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 SNORA67.2-201ENST00000384300 149 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 SNORA8.3-201ENST00000384679 139 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 MIR513C-201ENST00000401352 84 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 AC009969.1-201ENST00000438726 172 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.67□□□□□ -1.98
POLR2AP24928 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR2AP24928 MIR4423-201ENST00000580922 80 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 MIR4744-201ENST00000581563 82 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 AP000942.3-201ENST00000603702 160 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 MIR8070-201ENST00000616510 88 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 AC008873.1-201ENST00000625051 138 ntBASIC2.67□□□□□ -1.98
POLR2AP24928 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
POLR2AP24928 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms