Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SNORD23.1-201ENST00000408212 104 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 RNA5SP501-201ENST00000410990 112 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 AC245047.3-201ENST00000429428 127 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 AC107083.1-201ENST00000439643 279 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.94□□□□□ -1.94
VAMP1P23763 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VAMP1P23763 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.94□□□□□ -1.94
VAMP1P23763 RNY3P16-201ENST00000516338 101 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 RNU6-341P-201ENST00000516973 96 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 AP002392.1-201ENST00000537692 208 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VAMP1P23763 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
VAMP1P23763 SNORD56.3-201ENST00000363507 71 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 RNU4-10P-201ENST00000364383 140 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 SNORA48.1-201ENST00000390879 135 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 RPS26P45-201ENST00000471748 340 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.93□□□□□ -1.94
VAMP1P23763 RNVU1-2-201ENST00000516326 135 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 RNU7-128P-201ENST00000517247 62 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 AP002004.2-201ENST00000531656 154 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 MIR3138-201ENST00000585238 82 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 MIR203B-201ENST00000636080 86 ntBASIC2.93□□□□□ -1.94
VAMP1P23763 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VAMP1P23763 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.93□□□□□ -1.94
VAMP1P23763 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.92□□□□□ -1.94
VAMP1P23763 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VAMP1P23763 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VAMP1P23763 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VAMP1P23763 Y_RNA.265-201ENST00000364677 108 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 RNU6-969P-201ENST00000383900 105 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 RNU6-950P-201ENST00000384651 107 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 MIR520A-201ENST00000384862 85 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VAMP1P23763 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.92□□□□□ -1.94
VAMP1P23763 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.92□□□□□ -1.94
VAMP1P23763 AL049830.1-201ENST00000468034 425 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 Y_RNA.714-201ENST00000517065 90 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 AC100767.1-201ENST00000528178 123 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 AC021269.2-201ENST00000532318 330 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 AP003355.3-201ENST00000623465 114 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 AC022513.1-201ENST00000624512 117 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 U6.108-201ENST00000637764 58 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 AC100821.1-201ENST00000523153 2479 ntBASIC2.92□□□□□ -1.94
VAMP1P23763 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VAMP1P23763 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAMP1P23763 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
VAMP1P23763 AL356274.2-201ENST00000624379 3752 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 MIR148B-201ENST00000362252 99 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 Y_RNA.203-201ENST00000364106 102 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 RNA5SP479-201ENST00000364858 117 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 RNU6-1080P-201ENST00000383982 107 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 RNU4-70P-201ENST00000384579 139 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 MIR526A2-201ENST00000390198 65 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 SNORA3.3-201ENST00000408712 125 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 RNU6-383P-201ENST00000410864 94 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 RNA5SP450-201ENST00000411206 102 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 COX6CP10-201ENST00000416832 224 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 MTND2P29-201ENST00000438595 412 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.91□□□□□ -1.94
VAMP1P23763 AC021205.2-201ENST00000480069 347 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.91□□□□□ -1.94
VAMP1P23763 AC104027.1-201ENST00000521887 300 ntBASIC2.91□□□□□ -1.94
VAMP1P23763 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.91□□□□□ -1.94
VAMP1P23763 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.91□□□□□ -1.94
VAMP1P23763 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
VAMP1P23763 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VAMP1P23763 RNA5SP109-201ENST00000391010 116 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 AC092017.2-201ENST00000427600 362 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 CYCSP4-201ENST00000429682 331 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.9□□□□□ -1.95
VAMP1P23763 RN7SL323P-201ENST00000494712 295 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 RNU6-1007P-201ENST00000516586 107 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 RNU2-19P-201ENST00000517288 84 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.9□□□□□ -1.95
VAMP1P23763 MIR4277-201ENST00000578298 84 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 AL929325.1-201ENST00000603096 117 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 MIR6748-201ENST00000610433 71 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 AL445567.2-201ENST00000618935 498 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 AC012640.5-201ENST00000623897 319 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 MIR7641-1-201ENST00000627518 61 ntBASIC2.9□□□□□ -1.95
VAMP1P23763 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.9□□□□□ -1.95
VAMP1P23763 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
VAMP1P23763 Y_RNA.785-201ENST00000384290 109 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VAMP1P23763 RPL21P3-201ENST00000395517 478 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 BMS1P22-201ENST00000414726 313 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.89□□□□□ -1.95
VAMP1P23763 MLLT10P1-201ENST00000418346 262 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 PIGPP3-201ENST00000425307 415 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 AC011753.1-201ENST00000451001 220 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 RN7SKP164-201ENST00000516138 266 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 SCARNA14-201ENST00000516903 136 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 MRPL49P2-201ENST00000521066 465 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.89□□□□□ -1.95
VAMP1P23763 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.89□□□□□ -1.95
VAMP1P23763 MIR5688-201ENST00000580619 83 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 AC091178.2-201ENST00000584401 117 ntBASIC2.89□□□□□ -1.95
VAMP1P23763 AC011921.3-201ENST00000605540 361 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms