Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.82□□□□□ -2.12
CDH3P22223 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.82□□□□□ -2.12
CDH3P22223 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDH3P22223 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.81□□□□□ -2.12
CDH3P22223 Y_RNA.112-201ENST00000363250 102 ntBASIC1.81□□□□□ -2.12
CDH3P22223 U3.8-201ENST00000363675 217 ntBASIC1.81□□□□□ -2.12
CDH3P22223 Y_RNA.605-201ENST00000410577 105 ntBASIC1.81□□□□□ -2.12
CDH3P22223 RNU6-57P-201ENST00000411348 103 ntBASIC1.81□□□□□ -2.12
CDH3P22223 ELOCP21-201ENST00000412558 336 ntBASIC1.81□□□□□ -2.12
CDH3P22223 AC060773.1-201ENST00000421698 310 ntBASIC1.81□□□□□ -2.12
CDH3P22223 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH3P22223 NDUFB4P10-201ENST00000452541 359 ntBASIC1.81□□□□□ -2.12
CDH3P22223 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH3P22223 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
CDH3P22223 RNU6-1170P-201ENST00000515974 106 ntBASIC1.81□□□□□ -2.12
CDH3P22223 Y_RNA.661-201ENST00000516003 99 ntBASIC1.81□□□□□ -2.12
CDH3P22223 RNU6-948P-201ENST00000516374 107 ntBASIC1.81□□□□□ -2.12
CDH3P22223 AC091144.1-201ENST00000519573 138 ntBASIC1.81□□□□□ -2.12
CDH3P22223 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.81□□□□□ -2.12
CDH3P22223 GNAI2P1-201ENST00000541815 315 ntBASIC1.81□□□□□ -2.12
CDH3P22223 U2.1-201ENST00000618978 145 ntBASIC1.81□□□□□ -2.12
CDH3P22223 AL159152.1-201ENST00000635019 2587 ntBASIC1.8□□□□□ -2.12
CDH3P22223 ZNF72P-201ENST00000425869 1908 ntBASIC1.8□□□□□ -2.12
CDH3P22223 Y_RNA.813-201ENST00000364639 102 ntBASIC1.8□□□□□ -2.12
CDH3P22223 RNU1-115P-201ENST00000365329 160 ntBASIC1.8□□□□□ -2.12
CDH3P22223 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
CDH3P22223 Y_RNA.595-201ENST00000410403 105 ntBASIC1.8□□□□□ -2.12
CDH3P22223 AC016909.1-201ENST00000415916 166 ntBASIC1.8□□□□□ -2.12
CDH3P22223 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH3P22223 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
CDH3P22223 RNU6-221P-201ENST00000459541 99 ntBASIC1.8□□□□□ -2.12
CDH3P22223 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
CDH3P22223 RNU4-77P-201ENST00000516692 156 ntBASIC1.8□□□□□ -2.12
CDH3P22223 AL442163.3-201ENST00000554110 156 ntBASIC1.8□□□□□ -2.12
CDH3P22223 AC022254.1-201ENST00000567857 235 ntBASIC1.8□□□□□ -2.12
CDH3P22223 AC092447.9-201ENST00000603395 144 ntBASIC1.8□□□□□ -2.12
CDH3P22223 AC090971.5-201ENST00000621102 293 ntBASIC1.8□□□□□ -2.12
CDH3P22223 snoZ196.1-201ENST00000625269 89 ntBASIC1.8□□□□□ -2.12
CDH3P22223 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDH3P22223 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH3P22223 Y_RNA.31-201ENST00000362574 102 ntBASIC1.79□□□□□ -2.12
CDH3P22223 RNU6-708P-201ENST00000384217 107 ntBASIC1.79□□□□□ -2.12
CDH3P22223 RNY1P14-201ENST00000384426 108 ntBASIC1.79□□□□□ -2.12
CDH3P22223 RNY3P4-201ENST00000384428 101 ntBASIC1.79□□□□□ -2.12
CDH3P22223 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CDH3P22223 SNORA26.9-201ENST00000391322 122 ntBASIC1.79□□□□□ -2.12
CDH3P22223 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDH3P22223 MIR1185-2-201ENST00000408687 86 ntBASIC1.79□□□□□ -2.12
CDH3P22223 SNORD12B-201ENST00000410433 91 ntBASIC1.79□□□□□ -2.12
CDH3P22223 RNA5SP501-201ENST00000410990 112 ntBASIC1.79□□□□□ -2.12
CDH3P22223 RPS20P15-201ENST00000412792 311 ntBASIC1.79□□□□□ -2.12
CDH3P22223 HSPE1P21-201ENST00000438283 308 ntBASIC1.79□□□□□ -2.12
CDH3P22223 AC007677.1-201ENST00000445757 515 ntBASIC1.79□□□□□ -2.12
CDH3P22223 UQCRBP2-201ENST00000447827 297 ntBASIC1.79□□□□□ -2.12
CDH3P22223 AC074290.1-201ENST00000448883 135 ntBASIC1.79□□□□□ -2.12
CDH3P22223 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH3P22223 RNU6-911P-201ENST00000516523 104 ntBASIC1.79□□□□□ -2.12
CDH3P22223 AC015712.3-201ENST00000559380 164 ntBASIC1.79□□□□□ -2.12
CDH3P22223 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH3P22223 SNORD58B-201ENST00000607313 66 ntBASIC1.79□□□□□ -2.12
CDH3P22223 AC083806.3-201ENST00000614016 455 ntBASIC1.79□□□□□ -2.12
CDH3P22223 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDH3P22223 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.78□□□□□ -2.12
CDH3P22223 Y_RNA.138-201ENST00000363462 102 ntBASIC1.78□□□□□ -2.12
CDH3P22223 RNU6-474P-201ENST00000384243 107 ntBASIC1.78□□□□□ -2.12
CDH3P22223 RNU6-308P-201ENST00000390957 107 ntBASIC1.78□□□□□ -2.12
CDH3P22223 MIR934-201ENST00000401241 83 ntBASIC1.78□□□□□ -2.12
CDH3P22223 AL117342.1-201ENST00000404861 406 ntBASIC1.78□□□□□ -2.12
CDH3P22223 ATP5J2P3-201ENST00000451550 258 ntBASIC1.78□□□□□ -2.12
CDH3P22223 PCNPP5-201ENST00000452246 481 ntBASIC1.78□□□□□ -2.12
CDH3P22223 SNORA40.9-201ENST00000515895 93 ntBASIC1.78□□□□□ -2.12
CDH3P22223 RNU6-237P-201ENST00000515985 71 ntBASIC1.78□□□□□ -2.12
CDH3P22223 RNVU1-2-201ENST00000516326 135 ntBASIC1.78□□□□□ -2.12
CDH3P22223 AC025647.1-201ENST00000517879 253 ntBASIC1.78□□□□□ -2.12
CDH3P22223 CYCSP23-201ENST00000519781 313 ntBASIC1.78□□□□□ -2.12
CDH3P22223 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH3P22223 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH3P22223 AC006600.1-201ENST00000572529 153 ntBASIC1.78□□□□□ -2.12
CDH3P22223 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
CDH3P22223 MIR3198-2-201ENST00000577868 80 ntBASIC1.78□□□□□ -2.12
CDH3P22223 AC005786.1-201ENST00000588553 154 ntBASIC1.78□□□□□ -2.12
CDH3P22223 VN1R91P-201ENST00000594377 169 ntBASIC1.78□□□□□ -2.12
CDH3P22223 AC007485.1-201ENST00000616755 206 ntBASIC1.78□□□□□ -2.12
CDH3P22223 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.78□□□□□ -2.12
CDH3P22223 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDH3P22223 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDH3P22223 MIR628-201ENST00000385229 95 ntBASIC1.77□□□□□ -2.13
CDH3P22223 SNORA48.1-201ENST00000390879 135 ntBASIC1.77□□□□□ -2.13
CDH3P22223 PMCHL1-202ENST00000423102 261 ntBASIC1.77□□□□□ -2.13
CDH3P22223 AC099677.2-201ENST00000436385 175 ntBASIC1.77□□□□□ -2.13
CDH3P22223 AC011406.1-201ENST00000512440 370 ntBASIC1.77□□□□□ -2.13
CDH3P22223 AC074133.1-201ENST00000515696 183 ntBASIC1.77□□□□□ -2.13
CDH3P22223 RNU6-1041P-201ENST00000516254 102 ntBASIC1.77□□□□□ -2.13
CDH3P22223 AP002001.1-203ENST00000534002 267 ntBASIC1.77□□□□□ -2.13
CDH3P22223 AC018448.1-201ENST00000552843 316 ntBASIC1.77□□□□□ -2.13
CDH3P22223 AC006001.4-201ENST00000622243 395 ntBASIC1.77□□□□□ -2.13
CDH3P22223 AL606534.2-204ENST00000635008 178 ntBASIC1.77□□□□□ -2.13
CDH3P22223 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.77□□□□□ -2.13
CDH3P22223 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDH3P22223 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 587.2 ms