Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.14□□□□□ -2.23
COL5A1P20908 AC087588.2-201ENST00000617667 426 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 AC137590.2-201ENST00000619709 240 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 SNORD98-201ENST00000636377 67 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 MIR7515-201ENST00000637837 67 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 Y_RNA.123-201ENST00000363338 102 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 SNORA63-201ENST00000363450 132 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 Y_RNA.395-201ENST00000383945 109 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 RNU6-890P-201ENST00000384121 107 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 RNU6-378P-201ENST00000384324 107 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 RNU6-1297P-201ENST00000384415 104 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 RNY3P4-201ENST00000384428 101 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 MIR95-201ENST00000385072 81 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 AL512604.1-201ENST00000404812 257 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 EBAG9P1-201ENST00000418955 543 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.13□□□□□ -2.23
COL5A1P20908 EIF4EP2-201ENST00000422816 654 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 PMCHL1-202ENST00000423102 261 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 AL353689.1-201ENST00000438895 199 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.13□□□□□ -2.23
COL5A1P20908 AL353752.1-201ENST00000454946 260 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 RNU6-1132P-201ENST00000459214 107 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 AC055731.1-201ENST00000474387 401 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.13□□□□□ -2.23
COL5A1P20908 SNORA40.14-201ENST00000516543 86 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 RNU6-113P-201ENST00000516653 101 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 Y_RNA.706-201ENST00000516933 99 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 CBX3P7-201ENST00000532876 502 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.13□□□□□ -2.23
COL5A1P20908 AC105245.1-201ENST00000581934 244 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 AC008749.1-201ENST00000597650 306 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 TCL6_2.1-201ENST00000615162 119 ntBASIC1.13□□□□□ -2.23
COL5A1P20908 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
COL5A1P20908 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
COL5A1P20908 Y_RNA.27-201ENST00000362540 103 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU6-1010P-201ENST00000362757 107 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU4-42P-201ENST00000364738 142 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU6-843P-201ENST00000384454 104 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU6-306P-201ENST00000384617 107 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU6-310P-201ENST00000384655 107 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MIR10B-201ENST00000385011 110 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 U6atac.2-201ENST00000408644 118 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RN7SKP61-201ENST00000410642 295 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A1P20908 Z82188.1-201ENST00000436709 154 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A1P20908 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.12□□□□□ -2.23
COL5A1P20908 RPL23AP3-201ENST00000453844 468 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MIR2053-201ENST00000459295 91 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 SNRPGP7-201ENST00000469016 106 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU7-175P-201ENST00000515915 61 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU6-764P-201ENST00000516396 105 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC144568.1-201ENST00000520139 137 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.12□□□□□ -2.23
COL5A1P20908 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A1P20908 AC090617.3-201ENST00000573670 475 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC006504.6-201ENST00000590142 199 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC022432.1-201ENST00000595739 310 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC091152.3-201ENST00000604227 325 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC007485.1-201ENST00000616755 206 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC091925.1-201ENST00000623204 462 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC080100.1-201ENST00000624239 5356 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 SNORD50.1-201ENST00000362987 71 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNA5SP257-201ENST00000363023 116 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU5B-2P-201ENST00000363036 113 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNA5SP457-201ENST00000363657 124 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU6-280P-201ENST00000364145 104 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNU6-220P-201ENST00000390919 107 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 SNORA12.2-201ENST00000391040 156 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 SNORA75.6-201ENST00000391318 127 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MRPL35P1-201ENST00000404272 572 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MRPS18CP6-201ENST00000423587 223 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
COL5A1P20908 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.12□□□□□ -2.23
COL5A1P20908 FCF1P4-201ENST00000448326 183 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A1P20908 AC074133.1-201ENST00000515696 183 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RNA5SP112-201ENST00000515937 99 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 RN7SKP295-201ENST00000517264 153 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 HSPE1P4-201ENST00000550617 308 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC027288.2-201ENST00000553028 243 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MIR3923-201ENST00000579521 83 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A1P20908 AL109918.3-201ENST00000603072 338 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 AL020996.3-201ENST00000606617 222 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MIR1244-1-201ENST00000612829 85 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.12□□□□□ -2.23
COL5A1P20908 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.12□□□□□ -2.23
COL5A1P20908 MIR1244-3-201ENST00000635744 85 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MIR1244-2-201ENST00000636449 85 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 MIR1244-4-202ENST00000636813 85 ntBASIC1.12□□□□□ -2.23
COL5A1P20908 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.11□□□□□ -2.23
COL5A1P20908 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
COL5A1P20908 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 Y_RNA.145-201ENST00000363527 102 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 Y_RNA.152-201ENST00000363578 100 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 RNU6-944P-201ENST00000364023 107 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 SNORD115-32-201ENST00000364079 82 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 MIR147B-201ENST00000390185 80 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 AC097463.2-201ENST00000421074 142 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms