Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR10B-201ENST00000385011 110 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 RNU6-321P-201ENST00000410912 106 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.26□□□□□ -2.21
HLA-DPA1P20036 DLGAP5P1-201ENST00000430307 464 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 SNORD65B-201ENST00000459126 73 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 RNU6-107P-201ENST00000516643 102 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 AC027419.1-201ENST00000522976 328 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 MIR5695-201ENST00000579717 85 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 MIR4438-201ENST00000585271 93 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 AC015540.1-201ENST00000615828 501 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 SNORD3E-202ENST00000627253 216 ntBASIC1.26□□□□□ -2.21
HLA-DPA1P20036 RNU6-596P-201ENST00000365395 98 ntBASIC1.25□□□□□ -2.21
HLA-DPA1P20036 USMG5P1-201ENST00000425964 177 ntBASIC1.25□□□□□ -2.21
HLA-DPA1P20036 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
HLA-DPA1P20036 RPS27P22-201ENST00000478056 241 ntBASIC1.25□□□□□ -2.21
HLA-DPA1P20036 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.25□□□□□ -2.21
HLA-DPA1P20036 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.25□□□□□ -2.21
HLA-DPA1P20036 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.25□□□□□ -2.21
HLA-DPA1P20036 AL162424.1-201ENST00000602325 221 ntBASIC1.25□□□□□ -2.21
HLA-DPA1P20036 MIR6078-201ENST00000611069 100 ntBASIC1.25□□□□□ -2.21
HLA-DPA1P20036 AL513423.1-201ENST00000621695 132 ntBASIC1.25□□□□□ -2.21
HLA-DPA1P20036 AC068137.4-201ENST00000638485 296 ntBASIC1.25□□□□□ -2.21
HLA-DPA1P20036 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HLA-DPA1P20036 ZNF299P-201ENST00000406845 1804 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DPA1P20036 Y_RNA.9-201ENST00000362354 101 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 AC009161.1-201ENST00000417306 376 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DPA1P20036 AC005840.1-201ENST00000498412 377 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 AC093534.1-201ENST00000504977 132 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 RNU6-864P-201ENST00000516256 108 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 AC091144.1-201ENST00000519573 138 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DPA1P20036 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 AC073349.3-201ENST00000617616 186 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 AC106754.2-201ENST00000623006 233 ntBASIC1.24□□□□□ -2.21
HLA-DPA1P20036 RNY4P14-201ENST00000363656 96 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 RNU6-595P-201ENST00000363944 107 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 RNU6-1013P-201ENST00000384180 107 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 MTND4LP16-201ENST00000440828 295 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 AC092991.1-201ENST00000477176 376 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 AC010469.2-201ENST00000496412 480 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 RNU6-1314P-201ENST00000517139 104 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 AC023157.2-201ENST00000540596 141 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DPA1P20036 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DPA1P20036 BX284668.6-201ENST00000606899 438 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 AC006435.5-201ENST00000624486 112 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 AC100810.6-201ENST00000638068 285 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HLA-DPA1P20036 AC018630.2-201ENST00000534866 2403 ntBASIC1.23□□□□□ -2.21
HLA-DPA1P20036 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HLA-DPA1P20036 RNY1P10-201ENST00000363268 113 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 Y_RNA.490-201ENST00000384413 102 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 SNORA12.1-201ENST00000390873 148 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 MTND3P23-201ENST00000431980 347 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 MRPS10P1-201ENST00000448483 130 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 AC010598.1-201ENST00000510378 103 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 Y_RNA.683-201ENST00000516508 93 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 Y_RNA.706-201ENST00000516933 99 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 RNU6-165P-201ENST00000517170 99 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 RNU1-54P-201ENST00000517181 120 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.22□□□□□ -2.21
HLA-DPA1P20036 AL513534.2-201ENST00000603836 250 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 AL022345.2-201ENST00000606307 135 ntBASIC1.22□□□□□ -2.21
HLA-DPA1P20036 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HLA-DPA1P20036 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 RNU4-76P-201ENST00000364509 141 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 SNORA70.7-201ENST00000384159 133 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 RNU6-505P-201ENST00000384427 107 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 MIR660-201ENST00000385235 97 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 USP9YP16-201ENST00000430287 407 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DPA1P20036 DYNLT3P2-201ENST00000442517 295 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 STAG3L5P-204ENST00000443759 179 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 USP9YP23-201ENST00000455085 407 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 RNU6-1088P-201ENST00000516850 104 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DPA1P20036 AC012557.2-201ENST00000605919 418 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 SNORA28-201ENST00000606769 126 ntBASIC1.21□□□□□ -2.22
HLA-DPA1P20036 RNU6-1059P-201ENST00000363752 98 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 RNU6-392P-201ENST00000364926 101 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 RNU6-281P-201ENST00000384212 103 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 RNU6-831P-201ENST00000384548 107 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HLA-DPA1P20036 USP9YP30-201ENST00000430729 455 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.2□□□□□ -2.22
HLA-DPA1P20036 HSPE1P13-201ENST00000451143 297 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 RNU6-1114P-201ENST00000516022 107 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 RNU6-566P-201ENST00000516790 107 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 CYCSP23-201ENST00000519781 313 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 MIR4778-201ENST00000577635 80 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 AC100812.1-201ENST00000607622 580 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms