Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SL327P-201ENST00000488659 223 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 RNU4-71P-201ENST00000516258 113 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 CYCSP26-201ENST00000534107 320 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 AC009127.3-201ENST00000570531 403 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 RN7SL853P-201ENST00000617250 223 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.42□□□□□ -1.86
ERCC3P19447 MIR181A2-201ENST00000384863 110 ntBASIC3.42□□□□□ -1.86
ERCC3P19447 MIR873-201ENST00000401120 77 ntBASIC3.42□□□□□ -1.86
ERCC3P19447 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
ERCC3P19447 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.42□□□□□ -1.86
ERCC3P19447 RNA5SP20-201ENST00000515976 84 ntBASIC3.42□□□□□ -1.86
ERCC3P19447 RNU6-1041P-201ENST00000516254 102 ntBASIC3.42□□□□□ -1.86
ERCC3P19447 MIR4319-201ENST00000577285 85 ntBASIC3.42□□□□□ -1.86
ERCC3P19447 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.42□□□□□ -1.86
ERCC3P19447 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ERCC3P19447 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ERCC3P19447 SNORA27.1-201ENST00000362604 124 ntBASIC3.41□□□□□ -1.86
ERCC3P19447 RNA5SP126-201ENST00000365092 109 ntBASIC3.41□□□□□ -1.86
ERCC3P19447 AC016909.1-201ENST00000415916 166 ntBASIC3.41□□□□□ -1.86
ERCC3P19447 MTND5P15-201ENST00000434246 349 ntBASIC3.41□□□□□ -1.86
ERCC3P19447 HSPE1P21-201ENST00000438283 308 ntBASIC3.41□□□□□ -1.86
ERCC3P19447 RN7SL75P-201ENST00000461926 281 ntBASIC3.41□□□□□ -1.86
ERCC3P19447 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.41□□□□□ -1.86
ERCC3P19447 AC131280.1-202ENST00000624067 4211 ntBASIC3.4□□□□□ -1.86
ERCC3P19447 UBE2WP1-201ENST00000362030 340 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 RNU6-301P-201ENST00000384277 107 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 AC060773.1-201ENST00000421698 310 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 RPL23AP7-203ENST00000449021 469 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 AC108938.1-201ENST00000451204 136 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 AL109933.2-201ENST00000452651 260 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 RNU6-1146P-201ENST00000516282 102 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 RNU6-856P-201ENST00000516959 98 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC3P19447 AL031274.2-201ENST00000599419 203 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 AC007318.2-201ENST00000620999 243 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 snoU18.1-201ENST00000629629 71 ntBASIC3.4□□□□□ -1.87
ERCC3P19447 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC3P19447 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
ERCC3P19447 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
ERCC3P19447 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.39□□□□□ -1.87
ERCC3P19447 Y_RNA.76-201ENST00000362931 109 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 SNORD114-6-201ENST00000364393 72 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 RNU6-417P-201ENST00000384712 107 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 HMGN2P35-201ENST00000412164 270 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.39□□□□□ -1.87
ERCC3P19447 RPL39P40-201ENST00000445481 146 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.39□□□□□ -1.87
ERCC3P19447 RN7SL20P-201ENST00000488827 297 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.39□□□□□ -1.87
ERCC3P19447 AC011406.1-201ENST00000512440 370 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 MIR5194-201ENST00000582634 120 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ERCC3P19447 AL355596.1-201ENST00000565399 3996 ntBASIC3.39□□□□□ -1.87
ERCC3P19447 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ERCC3P19447 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ERCC3P19447 AC134026.1-201ENST00000623249 2239 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 AL356292.1-201ENST00000283110 373 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 Y_RNA.122-201ENST00000363331 96 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 Y_RNA.292-201ENST00000364904 97 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 RNU6-851P-201ENST00000384565 107 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 RNU6-136P-201ENST00000384663 107 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 MTCO2P33-201ENST00000402100 465 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 MIR1298-201ENST00000408783 112 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 RNU6-1186P-201ENST00000410429 97 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.38□□□□□ -1.87
ERCC3P19447 RNU6-1337P-201ENST00000516525 95 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 MIR4438-201ENST00000585271 93 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 AL136360.1-201ENST00000503377 1900 ntBASIC3.38□□□□□ -1.87
ERCC3P19447 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ERCC3P19447 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ERCC3P19447 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ERCC3P19447 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.37□□□□□ -1.87
ERCC3P19447 AC062016.1-201ENST00000355719 319 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 MIR340-201ENST00000362125 95 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 RNU6-23P-201ENST00000363283 107 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 Y_RNA.199-201ENST00000364014 102 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 Y_RNA.200-201ENST00000364018 102 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 RNU6-1048P-201ENST00000364054 107 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 RNA5SP184-201ENST00000411071 108 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 SUMO1P4-201ENST00000429430 302 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 Y_RNA.638-201ENST00000459374 113 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 RPS26P55-201ENST00000471178 356 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 SNORD116-28-201ENST00000516123 91 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 RNU6-63P-201ENST00000516690 95 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 AL137100.2-201ENST00000555786 315 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.37□□□□□ -1.87
ERCC3P19447 AL442067.1-201ENST00000613261 223 ntBASIC3.37□□□□□ -1.87
ERCC3P19447 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.37□□□□□ -1.87
ERCC3P19447 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.36□□□□□ -1.87
ERCC3P19447 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ERCC3P19447 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ERCC3P19447 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ERCC3P19447 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ERCC3P19447 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ERCC3P19447 RNU6-1272P-201ENST00000362776 107 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 RNU1-148P-201ENST00000384472 162 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 SNORA46-201ENST00000384762 135 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 MIR518C-201ENST00000384822 101 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 RNU6-763P-201ENST00000390865 106 ntBASIC3.36□□□□□ -1.87
ERCC3P19447 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms