Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.08□□□□□ -1.92
PDE6AP16499 Y_RNA.662-201ENST00000516028 97 ntBASIC3.08□□□□□ -1.92
PDE6AP16499 RNU6-436P-201ENST00000516171 114 ntBASIC3.08□□□□□ -1.92
PDE6AP16499 MIR3145-201ENST00000580727 82 ntBASIC3.08□□□□□ -1.92
PDE6AP16499 AC105245.1-201ENST00000581934 244 ntBASIC3.08□□□□□ -1.92
PDE6AP16499 MIR3199-1-201ENST00000582434 88 ntBASIC3.08□□□□□ -1.92
PDE6AP16499 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.08□□□□□ -1.92
PDE6AP16499 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDE6AP16499 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.08□□□□□ -1.92
PDE6AP16499 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDE6AP16499 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.08□□□□□ -1.92
PDE6AP16499 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.07□□□□□ -1.92
PDE6AP16499 Z82209.1-201ENST00000422141 2135 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 Y_RNA.170-201ENST00000363746 110 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 RNU6-944P-201ENST00000364023 107 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 Y_RNA.329-201ENST00000365209 107 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 MIR518C-201ENST00000384822 101 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 RN7SKP51-201ENST00000410781 304 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 OOSP1P1-201ENST00000423265 274 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.07□□□□□ -1.92
PDE6AP16499 AP005660.1-201ENST00000522972 293 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.07□□□□□ -1.92
PDE6AP16499 MRPS18CP4-201ENST00000535821 231 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 AC018630.3-201ENST00000542637 96 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.07□□□□□ -1.92
PDE6AP16499 AC069294.1-201ENST00000608397 350 ntBASIC3.07□□□□□ -1.92
PDE6AP16499 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDE6AP16499 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDE6AP16499 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDE6AP16499 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.07□□□□□ -1.92
PDE6AP16499 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.07□□□□□ -1.92
PDE6AP16499 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PDE6AP16499 RNU6-324P-201ENST00000363957 106 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 MIR27B-201ENST00000385129 97 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 MIR548B-201ENST00000385247 97 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 MIR300-201ENST00000401138 83 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 RNU6-394P-201ENST00000410735 107 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 AC024067.1-201ENST00000426199 223 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PDE6AP16499 AC080013.2-201ENST00000460866 323 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.06□□□□□ -1.92
PDE6AP16499 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
PDE6AP16499 MIR449C-201ENST00000516047 92 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 RNA5SP76-201ENST00000516277 87 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 RN7SKP282-201ENST00000516824 299 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.06□□□□□ -1.92
PDE6AP16499 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
PDE6AP16499 MIR5692C2-201ENST00000577959 77 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 MIR4308-201ENST00000580634 81 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PDE6AP16499 AC021753.1-201ENST00000635724 168 ntBASIC3.06□□□□□ -1.92
PDE6AP16499 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.06□□□□□ -1.92
PDE6AP16499 AC080128.1-201ENST00000474389 1917 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.05□□□□□ -1.92
PDE6AP16499 RNU4-82P-201ENST00000362443 140 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 SNORD115-30-201ENST00000364117 82 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 Y_RNA.243-201ENST00000364481 109 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 RNU7-14P-201ENST00000459331 62 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 HMGN2P9-201ENST00000476875 229 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
PDE6AP16499 AC005828.6-201ENST00000606610 232 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 snoU18.1-201ENST00000629629 71 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.05□□□□□ -1.92
PDE6AP16499 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.05□□□□□ -1.92
PDE6AP16499 MAPK10-266ENST00000641066 6555 ntBASIC3.05□□□□□ -1.92
PDE6AP16499 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PDE6AP16499 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
PDE6AP16499 RNU6-653P-201ENST00000363074 106 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 Y_RNA.262-201ENST00000364641 102 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 RNU6-234P-201ENST00000365229 104 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 U8.9-201ENST00000365667 134 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 Y_RNA.441-201ENST00000384123 112 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 SNORA67.4-201ENST00000384688 142 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 SNORA26.7-201ENST00000391288 122 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 MIR548I2-201ENST00000408348 149 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 MIR1283-1-201ENST00000408494 87 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.04□□□□□ -1.92
PDE6AP16499 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PDE6AP16499 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.04□□□□□ -1.92
PDE6AP16499 RNU6-1278P-201ENST00000516130 107 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 AC109329.2-201ENST00000519658 482 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 AC023043.3-201ENST00000593113 385 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 MIR5739-201ENST00000619803 80 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.04□□□□□ -1.92
PDE6AP16499 AC132825.6-201ENST00000638861 357 ntBASIC3.04□□□□□ -1.92
PDE6AP16499 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
PDE6AP16499 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PDE6AP16499 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PDE6AP16499 RNU6-923P-201ENST00000364753 107 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 SNORD50.2-201ENST00000365465 70 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 RNU6-211P-201ENST00000384047 107 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 AL031003.1-201ENST00000404229 172 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 MIR1185-2-201ENST00000408687 86 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 RPL23AP58-201ENST00000440453 469 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 AL513328.1-201ENST00000446460 224 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 AC074290.1-201ENST00000448883 135 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 AC090515.1-201ENST00000465295 476 ntBASIC3.03□□□□□ -1.92
PDE6AP16499 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms