Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SNORD115-20-201ENST00000365099 82 ntBASIC-1.73□□□□□ -2.69
VCANP13611 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.73□□□□□ -2.69
VCANP13611 MTND2P8-201ENST00000450555 1025 ntBASIC-1.73□□□□□ -2.69
VCANP13611 SNORD45.4-201ENST00000516629 73 ntBASIC-1.73□□□□□ -2.69
VCANP13611 AC073464.1-201ENST00000429823 534 ntBASIC-1.73□□□□□ -2.69
VCANP13611 AL627311.1-201ENST00000431514 115 ntBASIC-1.73□□□□□ -2.69
VCANP13611 RNA5SP117-201ENST00000365294 118 ntBASIC-1.74□□□□□ -2.69
VCANP13611 MIR513C-201ENST00000401352 84 ntBASIC-1.74□□□□□ -2.69
VCANP13611 AC092447.3-201ENST00000426027 686 ntBASIC-1.74□□□□□ -2.69
VCANP13611 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.74□□□□□ -2.69
VCANP13611 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.74□□□□□ -2.69
VCANP13611 AC073910.1-201ENST00000445047 438 ntBASIC-1.74□□□□□ -2.69
VCANP13611 AP000870.1-201ENST00000472927 406 ntBASIC-1.74□□□□□ -2.69
VCANP13611 AC090049.2-201ENST00000550377 109 ntBASIC-1.74□□□□□ -2.69
VCANP13611 AC138749.4-201ENST00000563970 127 ntBASIC-1.74□□□□□ -2.69
VCANP13611 AC239868.4-201ENST00000608318 671 ntBASIC-1.74□□□□□ -2.69
VCANP13611 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.74□□□□□ -2.69
VCANP13611 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-1.74□□□□□ -2.69
VCANP13611 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.75□□□□□ -2.69
VCANP13611 SNORD32B-201ENST00000364460 84 ntBASIC-1.75□□□□□ -2.69
VCANP13611 MTCO2P23-201ENST00000425216 680 ntBASIC-1.75□□□□□ -2.69
VCANP13611 RPL36P19-201ENST00000430744 301 ntBASIC-1.75□□□□□ -2.69
VCANP13611 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-1.75□□□□□ -2.69
VCANP13611 AC106754.2-201ENST00000623006 233 ntBASIC-1.75□□□□□ -2.69
VCANP13611 MTCO3P29-201ENST00000432119 779 ntBASIC-1.75□□□□□ -2.69
VCANP13611 AC093019.1-201ENST00000443135 252 ntBASIC-1.75□□□□□ -2.69
VCANP13611 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.75□□□□□ -2.69
VCANP13611 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.75□□□□□ -2.69
VCANP13611 SNORD24-201ENST00000383884 75 ntBASIC-1.75□□□□□ -2.69
VCANP13611 RNU6-393P-201ENST00000384475 107 ntBASIC-1.75□□□□□ -2.69
VCANP13611 MIRLET7B-201ENST00000385140 83 ntBASIC-1.75□□□□□ -2.69
VCANP13611 AL162424.1-201ENST00000602325 221 ntBASIC-1.75□□□□□ -2.69
VCANP13611 RNU6-317P-201ENST00000384031 107 ntBASIC-1.76□□□□□ -2.69
VCANP13611 MTCO1P17-201ENST00000411522 491 ntBASIC-1.76□□□□□ -2.69
VCANP13611 POLR2KP2-201ENST00000438155 177 ntBASIC-1.76□□□□□ -2.69
VCANP13611 Z82210.1-201ENST00000440037 231 ntBASIC-1.76□□□□□ -2.69
VCANP13611 RNU7-73P-201ENST00000458743 63 ntBASIC-1.76□□□□□ -2.69
VCANP13611 SERF1AP1-201ENST00000514575 187 ntBASIC-1.76□□□□□ -2.69
VCANP13611 MTCYBP5-201ENST00000423752 1135 ntBASIC-1.76□□□□□ -2.69
VCANP13611 MTND2P33-201ENST00000506452 1031 ntBASIC-1.76□□□□□ -2.69
VCANP13611 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.76□□□□□ -2.69
VCANP13611 RNU1-29P-201ENST00000606574 126 ntBASIC-1.76□□□□□ -2.69
VCANP13611 RNU4-88P-201ENST00000411220 86 ntBASIC-1.76□□□□□ -2.69
VCANP13611 MTND4P11-201ENST00000417020 1058 ntBASIC-1.76□□□□□ -2.69
VCANP13611 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.76□□□□□ -2.69
VCANP13611 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.76□□□□□ -2.69
VCANP13611 BTBD7P2-201ENST00000441962 620 ntBASIC-1.76□□□□□ -2.69
VCANP13611 AC090617.3-201ENST00000573670 475 ntBASIC-1.76□□□□□ -2.69
VCANP13611 UQCRBP2-201ENST00000447827 297 ntBASIC-1.77□□□□□ -2.69
VCANP13611 RPS27AP14-201ENST00000422868 454 ntBASIC-1.77□□□□□ -2.69
VCANP13611 USP9YP14-201ENST00000430663 563 ntBASIC-1.77□□□□□ -2.69
VCANP13611 RNU6-965P-201ENST00000516721 96 ntBASIC-1.77□□□□□ -2.69
VCANP13611 MIR3136-201ENST00000583498 78 ntBASIC-1.77□□□□□ -2.69
VCANP13611 RNY4P10-201ENST00000365571 96 ntBASIC-1.78□□□□□ -2.69
VCANP13611 AC006366.1-201ENST00000422002 759 ntBASIC-1.78□□□□□ -2.69
VCANP13611 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.78□□□□□ -2.69
VCANP13611 MIR4752-201ENST00000579672 72 ntBASIC-1.78□□□□□ -2.69
VCANP13611 AL137246.1-201ENST00000607072 977 ntBASIC-1.78□□□□□ -2.69
VCANP13611 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.78□□□□□ -2.69
VCANP13611 AL078595.1-201ENST00000404458 226 ntBASIC-1.78□□□□□ -2.69
VCANP13611 MTATP6P26-201ENST00000445926 662 ntBASIC-1.78□□□□□ -2.69
VCANP13611 MTCO3P28-201ENST00000513351 515 ntBASIC-1.78□□□□□ -2.69
VCANP13611 AL512326.2-201ENST00000426359 151 ntBASIC-1.78□□□□□ -2.69
VCANP13611 SNAP23P1-201ENST00000433229 246 ntBASIC-1.78□□□□□ -2.69
VCANP13611 RPS24P1-201ENST00000438550 371 ntBASIC-1.78□□□□□ -2.69
VCANP13611 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-1.78□□□□□ -2.69
VCANP13611 AC104576.1-201ENST00000524225 88 ntBASIC-1.78□□□□□ -2.69
VCANP13611 RNU6-217P-201ENST00000384164 104 ntBASIC-1.79□□□□□ -2.7
VCANP13611 RNU6-784P-201ENST00000384330 106 ntBASIC-1.79□□□□□ -2.7
VCANP13611 TPRKBP2-201ENST00000565969 475 ntBASIC-1.79□□□□□ -2.7
VCANP13611 MIR548AM-201ENST00000584298 74 ntBASIC-1.79□□□□□ -2.7
VCANP13611 MIR6854-201ENST00000614935 69 ntBASIC-1.79□□□□□ -2.7
VCANP13611 RNU6-205P-201ENST00000390858 107 ntBASIC-1.79□□□□□ -2.7
VCANP13611 USP9YP13-201ENST00000417797 480 ntBASIC-1.79□□□□□ -2.7
VCANP13611 BX276092.1-201ENST00000427368 251 ntBASIC-1.79□□□□□ -2.7
VCANP13611 MIR4748-201ENST00000578076 82 ntBASIC-1.79□□□□□ -2.7
VCANP13611 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.79□□□□□ -2.7
VCANP13611 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-1.79□□□□□ -2.7
VCANP13611 USP9YP12-201ENST00000450481 570 ntBASIC-1.79□□□□□ -2.7
VCANP13611 AC080188.3-201ENST00000624842 748 ntBASIC-1.79□□□□□ -2.7
VCANP13611 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.8□□□□□ -2.7
VCANP13611 MIR6874-201ENST00000635894 71 ntBASIC-1.8□□□□□ -2.7
VCANP13611 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.8□□□□□ -2.7
VCANP13611 RNU6-621P-201ENST00000364752 109 ntBASIC-1.8□□□□□ -2.7
VCANP13611 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.8□□□□□ -2.7
VCANP13611 AC093259.1-201ENST00000509755 300 ntBASIC-1.8□□□□□ -2.7
VCANP13611 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.8□□□□□ -2.7
VCANP13611 RNU4-76P-201ENST00000364509 141 ntBASIC-1.81□□□□□ -2.7
VCANP13611 RNU6-487P-201ENST00000365430 104 ntBASIC-1.81□□□□□ -2.7
VCANP13611 MIR509-1-201ENST00000385265 94 ntBASIC-1.81□□□□□ -2.7
VCANP13611 MIR509-2-201ENST00000390724 91 ntBASIC-1.81□□□□□ -2.7
VCANP13611 MIR300-201ENST00000401138 83 ntBASIC-1.81□□□□□ -2.7
VCANP13611 TMSB4XP6-201ENST00000415187 135 ntBASIC-1.81□□□□□ -2.7
VCANP13611 AL590383.1-201ENST00000428602 75 ntBASIC-1.81□□□□□ -2.7
VCANP13611 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.81□□□□□ -2.7
VCANP13611 AL109620.1-201ENST00000618738 1197 ntBASIC-1.81□□□□□ -2.7
VCANP13611 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.81□□□□□ -2.7
VCANP13611 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.81□□□□□ -2.7
VCANP13611 RNU6-128P-201ENST00000383976 107 ntBASIC-1.81□□□□□ -2.7
VCANP13611 SNORD41-201ENST00000386967 70 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms