Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNORA31.10-201ENST00000516482 106 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.38□□□□□ -2.47
COL6A3P12111 AC010525.2-201ENST00000590920 195 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNA5SP482-201ENST00000391269 118 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-447P-201ENST00000410293 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-355P-201ENST00000410427 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-791P-201ENST00000410467 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-705P-201ENST00000410601 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-860P-201ENST00000410860 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-785P-201ENST00000411324 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AL031779.1-201ENST00000415663 330 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AL512326.2-201ENST00000426359 151 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC133104.1-201ENST00000429100 218 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC069271.1-201ENST00000445577 156 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC026410.2-201ENST00000460281 156 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-572P-201ENST00000516724 80 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC013828.2-201ENST00000532487 235 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.38□□□□□ -2.47
COL6A3P12111 AC023538.1-201ENST00000534576 736 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC090615.1-201ENST00000577519 154 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 FGF7P1-201ENST00000582820 288 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AL596327.1-201ENST00000603629 213 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC122133.1-201ENST00000613964 233 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 U6.90-201ENST00000614007 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 U6.70-201ENST00000620287 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 MIR549A-201ENST00000385268 96 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 MTCO2P33-201ENST00000402100 465 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNU7-14P-201ENST00000459331 62 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNU6-714P-201ENST00000516963 103 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 SNORA74.3-201ENST00000517108 154 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AC110760.3-201ENST00000598794 467 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AL158042.1-201ENST00000605338 460 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AC007684.1-201ENST00000609671 477 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 MIR6514-201ENST00000622549 70 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AC090617.9-201ENST00000623751 147 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNU1-76P-201ENST00000362903 159 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 SNORD56.1-201ENST00000362913 68 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNU6-819P-201ENST00000364116 107 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 MIR1302-7-201ENST00000408841 72 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNA5SP163-201ENST00000410304 99 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.39□□□□□ -2.47
COL6A3P12111 AC005002.2-201ENST00000438228 269 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 USP9YP29-201ENST00000445112 563 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
COL6A3P12111 AC010424.1-201ENST00000506336 297 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNU6-504P-201ENST00000516568 104 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AC018448.1-201ENST00000552843 316 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 MIR4770-201ENST00000579149 58 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AC016252.1-201ENST00000609721 474 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.39□□□□□ -2.47
COL6A3P12111 AC006927.4-201ENST00000639187 543 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNU6-228P-201ENST00000362700 106 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 RNU6-364P-201ENST00000384387 107 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 SNORD116-23-201ENST00000384645 92 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AL359634.1-202ENST00000404721 284 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.39□□□□□ -2.47
COL6A3P12111 AC007327.1-201ENST00000447461 264 ntBASIC-0.39□□□□□ -2.47
COL6A3P12111 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.39□□□□□ -2.47
COL6A3P12111 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 RNA5SP117-201ENST00000365294 118 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 MIR526A1-201ENST00000384897 85 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 U8.16-201ENST00000391279 133 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL6A3P12111 TPT1P7-201ENST00000458300 517 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL6A3P12111 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 RNU6-180P-201ENST00000516697 61 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AC012433.1-201ENST00000588916 398 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 uc_338.28-201ENST00000612082 187 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 RNU6-891P-201ENST00000384280 111 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 RNU6-796P-201ENST00000391086 107 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL6A3P12111 MTND3P17-201ENST00000416968 344 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AL590135.1-201ENST00000422215 156 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AL365338.1-201ENST00000422282 858 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AC019205.3-201ENST00000424573 156 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AL133396.1-201ENST00000432048 687 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AC016700.2-201ENST00000446011 156 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AC104629.1-201ENST00000494226 508 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AC015911.1-201ENST00000495111 156 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL6A3P12111 RNU2-34P-201ENST00000516534 121 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 CR383656.4-201ENST00000546909 122 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AC133485.4-201ENST00000561835 220 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 MIR3925-201ENST00000584674 77 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms