Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 USP9YP28-201ENST00000435142 589 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC079354.2-201ENST00000453523 154 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 RNA5SP57-201ENST00000459463 123 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC079140.2-201ENST00000506193 142 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC103851.1-201ENST00000506833 274 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC046134.1-201ENST00000514454 666 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 RNU6-911P-201ENST00000516523 104 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC034114.1-201ENST00000520293 285 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AL590705.4-201ENST00000532209 134 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC005668.1-201ENST00000571142 476 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 Z98751.3-201ENST00000604447 521 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 LARP7P1-201ENST00000605576 316 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC104260.1-201ENST00000616660 539 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 AC092794.2-201ENST00000620933 563 ntBASIC0.85□□□□□ -2.27
COL11A1P12107 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
COL11A1P12107 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.84□□□□□ -2.27
COL11A1P12107 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
COL11A1P12107 RNU6-280P-201ENST00000364145 104 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 RNU6-338P-201ENST00000383888 105 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
COL11A1P12107 SNORA75.4-201ENST00000391278 119 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 AL139396.1-201ENST00000421137 167 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 AC012306.1-201ENST00000423267 114 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 AL590632.1-201ENST00000424289 371 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.84□□□□□ -2.28
COL11A1P12107 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.84□□□□□ -2.28
COL11A1P12107 USP9YP30-201ENST00000430729 455 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 MTND3P23-201ENST00000431980 347 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.84□□□□□ -2.28
COL11A1P12107 MTND5P20-201ENST00000448677 143 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 MTND1P17-201ENST00000448961 204 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.84□□□□□ -2.28
COL11A1P12107 HMGN2P26-201ENST00000463169 339 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 AC007215.1-201ENST00000464893 276 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.84□□□□□ -2.28
COL11A1P12107 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.84□□□□□ -2.28
COL11A1P12107 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.84□□□□□ -2.28
COL11A1P12107 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.84□□□□□ -2.28
COL11A1P12107 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.84□□□□□ -2.28
COL11A1P12107 MIR4801-201ENST00000582704 82 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 SCARNA4-201ENST00000629045 128 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 MIR1248-201ENST00000629190 106 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 SNORA43.4-201ENST00000629559 138 ntBASIC0.84□□□□□ -2.28
COL11A1P12107 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
COL11A1P12107 Y_RNA.123-201ENST00000363338 102 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 Y_RNA.279-201ENST00000364763 95 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 RNU6-611P-201ENST00000384276 104 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 RPL21P111-201ENST00000418453 477 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 AC139712.2-201ENST00000424302 339 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 MTCO3P29-201ENST00000432119 779 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 MTND1P4-201ENST00000435196 415 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 RPS3AP52-201ENST00000435639 297 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 AC098614.3-201ENST00000438957 440 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.83□□□□□ -2.28
COL11A1P12107 AC091874.1-201ENST00000511402 339 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.83□□□□□ -2.28
COL11A1P12107 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.83□□□□□ -2.28
COL11A1P12107 UBL5P4-201ENST00000562584 236 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 MZT1P2-201ENST00000604387 248 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 RPL17P51-201ENST00000605218 238 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 AL355802.3-201ENST00000607571 545 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 AC025253.1-201ENST00000613623 543 ntBASIC0.83□□□□□ -2.28
COL11A1P12107 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.83□□□□□ -2.28
COL11A1P12107 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
COL11A1P12107 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
COL11A1P12107 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.83□□□□□ -2.28
COL11A1P12107 SNORD115-3-201ENST00000363100 82 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 SNORA25.8-201ENST00000364831 128 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.82□□□□□ -2.28
COL11A1P12107 SNORD116-29-201ENST00000384516 83 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNU6-601P-201ENST00000384540 107 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 MIR521-1-201ENST00000384902 87 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
COL11A1P12107 RNA5SP100-201ENST00000410903 110 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNA5SP59-201ENST00000410922 110 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNA5SP501-201ENST00000410990 112 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.82□□□□□ -2.28
COL11A1P12107 AL590135.1-201ENST00000422215 156 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC019205.3-201ENST00000424573 156 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 MTCYBP10-201ENST00000424905 650 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC016700.2-201ENST00000446011 156 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC015911.1-201ENST00000495111 156 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC026782.1-201ENST00000512952 449 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.82□□□□□ -2.28
COL11A1P12107 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.82□□□□□ -2.28
COL11A1P12107 AC074133.1-201ENST00000515696 183 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNU6-1146P-201ENST00000516282 102 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 SNORA25.14-201ENST00000516481 132 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNU6-1098P-201ENST00000516772 96 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNU1-54P-201ENST00000517181 120 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC105029.1-201ENST00000520250 669 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.82□□□□□ -2.28
COL11A1P12107 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.82□□□□□ -2.28
COL11A1P12107 MIR4273-201ENST00000582824 84 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AP001485.1-201ENST00000604799 199 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AL132765.2-201ENST00000610812 351 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms